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Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly repetitive transposable elements

bioRxiv

Jan 21, 2014

Rajiv C. McCoyAnna-Sophie Fiston-Lavier

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Abstract

High-throughput DNA sequencing technologies have revolutionized genomic analysis, including the de novo assembly of whole genomes. Nevertheless, assembly of complex genomes remains challenging, in part due to the presence of dispersed repeats which introduce ambiguity during genome reco...read more

Mentioned in this Paper

DNA Transposable Elements
Heterochromatin-specific nonhistone chromosomal protein HP-1
Drosophila melanogaster
Organism
Genome
Transient Elastography
Molecular Assembly/Self Assembly
Reconstructive Surgical Procedures
Comparative Genomic Analysis
Trees (plant)
122
3
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  • Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly repetitive transposable elements

    bioRxiv

    Jan 21, 2014

    Rajiv C. McCoyAnna-Sophie Fiston-Lavier

    PMID: 990001834

    DOI: 10.1101/001834

    Abstract

    High-throughput DNA sequencing technologies have revolutionized genomic analysis, including the de novo assembly of whole genomes. Nevertheless, assembly of complex genomes remains challenging, in part due to the presence of dispersed repeats which introduce ambiguity during genome reco...read more

    Mentioned in this Paper

    DNA Transposable Elements
    Heterochromatin-specific nonhistone chromosomal protein HP-1
    Drosophila melanogaster
    Organism
    Genome
    122
    3

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