Insights into telomerase action from high-throughput sequencing of S. pombe telomeres

BioRxiv : the Preprint Server for Biology
Henrietta W BennettMegan C King

Abstract

We have developed a high-throughput sequencing approach that enables us to determine terminal telomere sequences from tens of thousands of individual Schizosaccharomyces pombe telomeres. This method provides unprecedented coverage of telomeric sequence complexity in fission yeast. S. pombe telomeres are composed of modular degenerate repeats that can be explained by variation in usage of the TER1 RNA template during reverse transcription. Taking advantage of this deep sequencing approach, we find that like repeat modules are highly correlated within individual telomeres. Moreover, repeat module preference varies with telomere length, suggesting that existing repeats promote the incorporation of like repeats and/or that specific conformations of the telomerase holoenzyme efficiently and/or processively add repeats of like nature. After the loss of telomerase activity, this sequencing and analysis pipeline defines a population of telomeres with altered sequence content. This approach should be adaptable to study telomeric repeats in other organisms and can provide new insights into telomere sequence content at high density.

Related Concepts

CCR8 protein, human
Abnormal Degeneration
CCR8 gene
Nerve Degeneration
Nucleic Acid Sequencing
CCR8 wt Allele
Sequencing
Telomerase Activity
Telomerase
Telomere

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