Integrated Genomic and Network-Based Analyses of Complex Diseases and Human Disease Network

Journal of Genetics and Genomics = Yi Chuan Xue Bao
Olfat Al-HaraziDilek Colak

Abstract

A disease phenotype generally reflects various pathobiological processes that interact in a complex network. The highly interconnected nature of the human protein interaction network (interactome) indicates that, at the molecular level, it is difficult to consider diseases as being independent of one another. Recently, genome-wide molecular measurements, data mining and bioinformatics approaches have provided the means to explore human diseases from a molecular basis. The exploration of diseases and a system of disease relationships based on the integration of genome-wide molecular data with the human interactome could offer a powerful perspective for understanding the molecular architecture of diseases. Recently, subnetwork markers have proven to be more robust and reliable than individual biomarker genes selected based on gene expression profiles alone, and achieve higher accuracy in disease classification. We have applied one of these methodologies to idiopathic dilated cardiomyopathy (IDCM) data that we have generated using a microarray and identified significant subnetworks associated with the disease. In this paper, we review the recent endeavours in this direction, and summarize the existing methodologies and computation...Continue Reading

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Citations

Aug 9, 2016·Trends in Molecular Medicine·Rajendra Raghow
Mar 19, 2019·Omics : a Journal of Integrative Biology·Olfat Al-HaraziDilek Colak
Dec 25, 2021·Analytical and Bioanalytical Chemistry·Chao LiXiaohui Lin

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