Interindividual variability and co-regulation of DNA methylation differ among blood cell populations

Epigenetics : Official Journal of the DNA Methylation Society
Monique JacobyClaude P Muller

Abstract

DNA methylation regulates gene expression in a cell-type specific way. Although peripheral blood mononuclear cells (PBMCs) comprise a heterogeneous cell population, most studies of DNA methylation in blood are performed on total mononuclear cells. In this study, we investigated high resolution methylation profiles of 58 CpG sites dispersed over eight immune response genes in multiple purified blood cells from healthy adults and newborns. Adjacent CpG sites showed methylation levels that were increasingly correlated in adult blood vs. cord blood. Thus, while interindividual variability increases from newborn to adult blood, the underlying methylation changes may not be merely stochastic, but seem to be orchestrated as clusters of adjacent CpG sites. Multiple linear regression analysis showed that interindividual methylation variability was influenced by distance of average methylation levels to the closest border (0 or 100%), presence of transcription factor binding sites, CpG conservation across species and age. Furthermore, CD4+ and CD14+ cell types were negative predictors of methylation variability. Concerns that PBMC methylation differences may be confounded by variations in blood cell composition were justified for CpG sit...Continue Reading

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Related Concepts

DNA Methylation [PE]
T-Lymphocyte
Mononuclear Cells
Protein Methylation
Peripheral Blood Mononuclear Cells (Lab Test)
DNA Methylation
Promoter
DNA Methylation Regulation
Gene Expression
Methylation

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