Loci and candidate gene identification for resistance to Sclerotinia sclerotiorum in soybean (Glycine max L. Merr.) via association and linkage maps

The Plant Journal : for Cell and Molecular Biology
Xue ZhaoWenbin Li

Abstract

Soybean white mold (SWM), caused by Sclerotinia sclerotiorum ((Lib.) W. Phillips), is currently considered to be the second most important cause of soybean yield loss due to disease. Research is needed to identify SWM-resistant germplasm and gain a better understanding of the genetic and molecular basis of SWM resistance in soybean. Stem pigmentation after treatment with oxaloacetic acid is an effective indicator of resistance to SWM. A total of 128 recombinant inbred lines (RILs) derived from a cross of 'Maple Arrow' (partial resistant to SWM) and 'Hefeng 25' (susceptible) and 330 diverse soybean cultivars were screened for the soluble pigment concentration of their stems, which were treated with oxalic acid. Four quantitative trait loci (QTLs) underlying soluble pigment concentration were detected by linkage mapping of the RILs. Three hundred and thirty soybean cultivars were sequenced using the whole-genome encompassing approach and 25 179 single-nucleotide polymorphisms (SNPs) were detected for the fine mapping of SWM resistance genes by genome-wide association studies. Three out of five SNP markers representing a linkage disequilibrium (LD) block and a single locus on chromosome 13 (Gm13) were significantly associated with...Continue Reading

References

Mar 19, 1996·Proceedings of the National Academy of Sciences of the United States of America·X WangM Lawton
Mar 3, 2004·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Q J SongP B Cregan
Aug 7, 2004·Bioinformatics·J C BarrettM J Daly
Aug 24, 2007·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·Bertrand C Y Collard, David J Mackill
Feb 19, 2008·Trends in Plant Science·Andrew C AllanWilliam A Laing
Apr 9, 2008·Molecular Plant-microbe Interactions : MPMI·Kyoung Su KimMartin B Dickman
Jun 6, 2008·The Plant Journal : for Cell and Molecular Biology·Christian DubosLoïc Lepiniec
Jun 6, 2009·Bioinformatics·Ruiqiang LiJun Wang
Jan 16, 2010·Nature·Jeremy SchmutzScott A Jackson
Jan 22, 2010·Current Opinion in Plant Biology·J Antoni Rafalski
Aug 13, 2010·BMC Genomics·Xiaolei WuHenry T Nguyen
Oct 19, 2010·Plant Physiology and Biochemistry : PPB·Luca PierantoniSilviero Sansavini
Oct 26, 2010·Nature Genetics·Xuehui HuangBin Han
Nov 17, 2010·Proceedings of the National Academy of Sciences of the United States of America·Yan LiJustin O Borevitz
Jul 17, 2012·Bioinformatics·Alexander E LipkaZhiwu Zhang
Dec 26, 2012·Proceedings of the National Academy of Sciences of the United States of America·Geoffrey P MorrisStephen Kresovich
Nov 28, 2013·Annual Review of Plant Biology·Xuehui Huang, Bin Han
Jan 3, 2014·BMC Genomics·Eun-Young HwangPerry B Cregan

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Citations

Feb 22, 2016·BMC Genomics·Aurore DesgrouxMarie-Laure Pilet-Nayel
Jun 10, 2017·PloS One·Leonardo de Azevedo PeixotoAsheesh K Singh
Jan 25, 2020·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Ziliang LuoJianping Wang
Feb 20, 2017·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Chaoshu ZhangJianfeng Weng
Jan 10, 2017·Frontiers in Plant Science·Giriraj KumawatGyanesh K Satpute
Aug 23, 2019·International Journal of Molecular Sciences·Libin WeiHaiyang Zhang
Mar 4, 2019·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Bingzhi JiangHai Nian
Nov 5, 2019·Frontiers in Plant Science·Zheng WangXiao-Li Tan

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