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Mapping a viral phylogeny onto outbreak trees to improve host transmission inference

bioRxiv

Nov 11, 2014

Stephen P Velsko, Jonathan E Allen

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Abstract

Developing methods to reconstruct transmission histories for viral outbreaks could provide critical information to support locating sources of disease transmission. Phylogenetic methods used to measure the degree of relatedness among sequenced viral samples have proven useful in identif...read more

Mentioned in this Paper

Communicable Diseases
Mouth Diseases
Evaluation
Simulation
Epidemiology
Virus
Inference
Nucleic Acid Sequencing
Trees (plant)
Foot
9
7
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  • Mapping a viral phylogeny onto outbreak trees to improve host transmission inference

    bioRxiv

    Nov 11, 2014

    Stephen P Velsko, Jonathan E Allen

    PMID: 990010389

    DOI: 10.1101/010389

    Abstract

    Developing methods to reconstruct transmission histories for viral outbreaks could provide critical information to support locating sources of disease transmission. Phylogenetic methods used to measure the degree of relatedness among sequenced viral samples have proven useful in identif...read more

    Mentioned in this Paper

    Communicable Diseases
    Mouth Diseases
    Evaluation
    Simulation
    Epidemiology
    9
    7

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