Metacommunity phylogenetics: separating the roles of environmental filters and historical biogeography

Ecology Letters
Mathew A LeiboldPedro R Peres-Neto


Biogeographical, evolutionary and ecological processes interact to regulate patterns in metacommunities. However, as there are few quantitative methods for evaluating their joint effects, resolving this interaction is difficult. We develop a method that aims to evaluate the interaction between phylogenetic structure, historical biogeographic events and environmental filtering in driving species distributions in a large-scale metacommunity. Using freshwater zooplankton as a case study, we contrast the phylogenetic metacommunity structure of calanoid copepods and an ecologically similar but more vagile group, daphniids, in the northeastern US. We find that legacies of historical biogeographical events have strongly constrained calanoid distributions within this area, but that adaptation to different water chemistry and lake morphology drives the metacommunity structure of daphniids. Our findings show that biogeographic history and metacommunity processes jointly regulate community structure in these lakes and suggest that this also depends on factors that affect the colonization rate of different types of organisms.


Mar 29, 1996·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·J K Colbourne, P D Hebert
Jul 17, 2001·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·E Hubbell
Nov 24, 2001·Molecular Biology and Evolution·A R Omilian, D J Taylor
Jan 30, 2007·Ecology Letters·T Jonathan DaviesJohn L Gittleman
Sep 12, 2007·Ecology Letters·Matthew R HelmusAnthony R Ives
Oct 2, 2007·The American Naturalist·Robert E Ricklefs
Sep 27, 2007·Evolution; International Journal of Organic Evolution·Liam J RevellJonathan B Losos
Oct 1, 2008·Trends in Ecology & Evolution·Shinichi Nakagawa, Robert P Freckleton
Oct 1, 2008·Trends in Ecology & Evolution·Brent C Emerson, Rosemary G Gillespie
Oct 15, 2008·The American Naturalist·Mark A McPeek
Feb 7, 2009·Science·Sergey Gavrilets, Jonathan B Losos
May 29, 2009·Ecology Letters·Jeannine Cavender-BaresSteven W Kembel
Aug 12, 2009·Evolution; International Journal of Organic Evolution·Daniel S MoenJ J Wiens
Mar 27, 2010·Ecology Letters·Valério D Pillar, Leandro Duarte


Mar 22, 2012·Biological Reviews of the Cambridge Philosophical Society·Nicolas MouquetWilfried Thuiller
Dec 6, 2011·PloS One·Blake MatthewsJonathan B Shurin
Jul 23, 2013·PloS One·David G AngelerRichard K Johnson
Jun 7, 2011·Trends in Ecology & Evolution·Jürg B LogueMetacommunity Working Group
Feb 1, 2012·Environmental Microbiology Reports·Eva S Lindström, Silke Langenheder
Jan 29, 2011·Ecology Letters·François MassolMathew A Leibold
Apr 24, 2013·Ecology and Evolution·Timothée PoisotDominique Gravel
Oct 15, 2013·Molecular Ecology Resources·Simon JolyTerry A Wheeler
May 3, 2014·Global Ecology and Biogeography : a Journal of Macroecology·Tamara MünkemüllerWilfried Thuiller
Jun 13, 2015·Science·César CapinhaHenrique Miguel Pereira
Jun 4, 2015·Ecology Letters·Nicolas HubertNicolas Mouquet
Aug 6, 2013·FEMS Microbiology Reviews·Eva BoonRobert G Beiko
Apr 12, 2012·Molecular Phylogenetics and Evolution·Mehdi LayeghifardVladimir Makarenkov
Dec 4, 2014·Trends in Ecology & Evolution·W John KressDavid L Erickson
Nov 21, 2017·PloS One·Polyanna da Conceição BispoPitágoras da Conceição Bispo
May 11, 2011·Ecology Letters·Blake MatthewsCaroline B Turner
Apr 12, 2012·Environmental Microbiology·Larry M Feinstein, Christopher B Blackwood
Jan 4, 2017·The New Phytologist·Daijiang LiDonald M Waller
May 23, 2017·F1000Research·Frédéric Guichard
Aug 16, 2017·Nature Ecology & Evolution·Hirokazu TojuJohn N Thompson
Sep 14, 2020·The Science of the Total Environment·Nicole Voelker, Christopher M Swan
Feb 11, 2021·Ecology Letters·T Jonathan Davies

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