miR2GO: comparative functional analysis for microRNAs

Bioinformatics
Anindya Bhattacharya, Yan Cui

Abstract

miR2GO is a web-based platform for comparative analyses of human miRNA functions. It includes two programs: miRmut2GO and miRpair2GO. miRmut2GO implements a knowledge-based method to assess the functional effects of genetic and somatic mutations in microRNA seed regions. The functional effects of a mutation are analysed by semantic comparison of enriched gene ontology (GO) annotations of the target gene sets for the wild-type and mutated alleles. miRpair2GO compares the functions of two different miRNAs based on the enriched functional annotations of their target gene sets. The miR2GO web server is available at http://compbio.uthsc.edu/miR2GO.

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Citations

Nov 19, 2015·Nucleic Acids Research·Anindya Bhattacharya, Yan Cui
Nov 19, 2015·Nucleic Acids Research·Most Mauluda AkhtarAntonio Domenico Procopio
Apr 29, 2016·BMC Bioinformatics·Bridget C RyanRobert L Chow
Jun 28, 2016·Molecular Diagnosis & Therapy·Eman A ToraihMohamad M El-Labban
Aug 4, 2016·Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire·Mohammad H HusseinManal S Fawzy
Apr 1, 2017·Interdisciplinary Sciences, Computational Life Sciences·Anjana RajendiranArchana Pan
Jun 24, 2017·Journal of Integrative Bioinformatics·Anindya Bhattacharya, Yan Cui
Feb 1, 2020·Briefings in Bioinformatics·Saidi WangHaiyan Hu
Nov 7, 2019·Nucleic Acids Research·Tim KehlAndreas Keller
Mar 24, 2017·Briefings in Functional Genomics·Vaibhav ShuklaKapaettu Satyamoorthy
Dec 8, 2016·Nucleic Acids Research·Tanvir AlamVladimir B Bajic
Apr 25, 2018·Scientific Reports·Janice DuyTimothy D Minogue
Oct 23, 2019·Molecular Therapy : the Journal of the American Society of Gene Therapy·Reginald V C T van der KwastA Yaël Nossent
Jul 3, 2021·International Journal of Molecular Sciences·Tapan BehlSimona Gabriela Bungau

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