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msHOT: modifying Hudson's ms simulator to incorporate crossover and gene conversion hotspots

Bioinformatics

Dec 8, 2006

Garrett Hellenthal, Matthew Stephens

Abstract

We have incorporated both crossover and gene conversion hotspots into an existing coalescent-based program for simulating genetic variation data for a sample of chromosomes from a population. The source code for msHOT is available at http://home.uchicago.edu/~rhudson1, along with accomp...read more

Mentioned in this Paper

Polaron
Genetics, Population
Genome Mapping
Computer Programs and Programming
Chromosomes
Crossing Over, Genetic
Gene Conversion
Variation (Genetics)
1
128
Paper Details
References
  • References7
  • Citations48
1
  • References7
  • Citations48
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msHOT: modifying Hudson's ms simulator to incorporate crossover and gene conversion hotspots

Bioinformatics

Dec 8, 2006

Garrett Hellenthal, Matthew Stephens

PMID: 17150995

DOI: 10.1093/bioinformatics/btl622

Abstract

We have incorporated both crossover and gene conversion hotspots into an existing coalescent-based program for simulating genetic variation data for a sample of chromosomes from a population. The source code for msHOT is available at http://home.uchicago.edu/~rhudson1, along with accomp...read more

Mentioned in this Paper

Polaron
Genetics, Population
Genome Mapping
Computer Programs and Programming
Chromosomes
Crossing Over, Genetic
Gene Conversion
Variation (Genetics)
1
128

Trending Feeds

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Related Papers

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GENOME: a rapid coalescent-based whole genome simulator

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SequenceLDhot: detecting recombination hotspots

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Paper Details
References
  • References7
  • Citations48
1
  • References7
  • Citations48
12345
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