Novel QTLs for photoperiodic flowering revealed by using reciprocal backcross inbred lines from crosses between japonica rice cultivars.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
K MatsubaraMasahiro Yano

Abstract

The rice japonica cultivars Nipponbare and Koshihikari differ in heading date and response of heading to photoperiod (photoperiod sensitivity). Using simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) markers, we conducted quantitative trait locus (QTL) analyses for heading date in a set of reciprocal backcross inbred lines (BILs) from crosses between Nipponbare and Koshihikari. Under natural-day conditions, transgressive segregation in days to heading (DTH) toward both early and late heading was observed in both BIL populations. QTL analyses revealed that two QTLs--on chromosomes 3 and 6--were involved in the difference in heading date between the parental cultivars. The Nipponbare allele at the QTLs on chromosomes 3 and 6 showed, respectively, increasing and decreasing effects on DTH in both BIL populations. The transgressive segregation observed in the BILs could be accounted for mainly by the complementary action of a set of alleles with opposing effects. Both QTLs were finely mapped as single Mendelian factors in secondary mapping populations (BC2F2 plants/BC2F3 lines). The QTL on chromosome 3 was mapped in the 1,140-kb interval between 94O03-4 (SSR) and OJ21G19-4 (SNP) and was designated Hd16. The QTL o...Continue Reading

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Citations

May 9, 2007·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·K MatsubaraM Yano
Feb 11, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Kiyosumi HoriMasahiro Yano
Jan 14, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Kaworu EbanaMasahiro Yano
Jul 27, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Taeko ShibayaMasahiro Yano
Apr 7, 2012·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Akira AbeRyohei Terauchi
Mar 10, 2009·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Yuki MondenTakatoshi Tanisaka
Apr 13, 2012·Plant & Cell Physiology·Liliana M Costa
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Nov 15, 2015·Plant Science : an International Journal of Experimental Plant Biology·Toshio YamamotoTadashi Hirasawa
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Jun 25, 2013·The Plant Journal : for Cell and Molecular Biology·Kiyosumi HoriMasahiro Yano
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Oct 4, 2016·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Kiyosumi HoriMasahiro Yano
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