Nuclear-cytoplasmic conflict in pea (Pisum sativum L.) is associated with nuclear and plastidic candidate genes encoding acetyl-CoA carboxylase subunits

PloS One
Vera S BogdanovaGennadiy V Vasiliev

Abstract

In crosses of wild and cultivated peas (Pisum sativum L.), nuclear-cytoplasmic incompatibility frequently occurs manifested as decreased pollen fertility, male gametophyte lethality, sporophyte lethality. High-throughput sequencing of plastid genomes of one cultivated and four wild pea accessions differing in cross-compatibility was performed. Candidate genes for involvement in the nuclear-plastid conflict were searched in the reconstructed plastid genomes. In the annotated Medicago truncatula genome, nuclear candidate genes were searched in the portion syntenic to the pea chromosome region known to harbor a locus involved in the conflict. In the plastid genomes, a substantial variability of the accD locus represented by nucleotide substitutions and indels was found to correspond to the pattern of cross-compatibility among the accessions analyzed. Amino acid substitutions in the polypeptides encoded by the alleles of a nuclear locus, designated as Bccp3, with a complementary function to accD, fitted the compatibility pattern. The accD locus in the plastid genome encoding beta subunit of the carboxyltransferase of acetyl-coA carboxylase and the nuclear locus Bccp3 encoding biotin carboxyl carrier protein of the same multi-subuni...Continue Reading

References

Oct 5, 1990·Journal of Molecular Biology·S F AltschulD J Lipman
Aug 1, 1993·The Plant Journal : for Cell and Molecular Biology·A Konieczny, F M Ausubel
Aug 1, 1994·PCR Methods and Applications·M A Frohman
Aug 22, 1997·Science·S D Tanksley, S R McCouch
May 3, 2000·The Plant Journal : for Cell and Molecular Biology·A DrescherR Bock
Nov 9, 2001·Annual Review of Genetics·J M Burke, M L Arnold
Aug 6, 2003·European Journal of Biochemistry·Sergey N FedosovLars Berglund
Jan 1, 1959·Cold Spring Harbor Symposia on Quantitative Biology·H LAVEN
May 8, 2004·The Plant Cell·Maureen R Hanson, Stéphane Bentolila
Jun 25, 2004·Bioscience, Biotechnology, and Biochemistry·Yukiko Sasaki, Yukio Nagano
Sep 2, 2004·Molecular Genetics and Genomics : MGG·P KalóG B Kiss
Oct 7, 2004·Molecular Genetics and Metabolism·L R DesviatM Ugarte
Apr 22, 2005·The Journal of Heredity·S B GehlharS F Kianian
May 4, 2005·Methods in Enzymology·Robert K JansenLiying Cui
Oct 26, 2005·Nucleic Acids Research·Jean-Jacques FavorySilva Lerbs-Mache
Apr 1, 2006·Doklady Biological Sciences : Proceedings of the Academy of Sciences of the USSR, Biological Sciences Sections·V S Bogdanova, O E Kosterin
Nov 3, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Vera S Bogdanova
Dec 1, 2007·Proceedings of the National Academy of Sciences of the United States of America·Robert K JansenJeffrey L Boore
Jun 27, 2008·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·David B LowryJohn H Willis
Aug 6, 2008·Proceedings of the National Academy of Sciences of the United States of America·Jiongjiong ChenQifa Zhang
Nov 27, 2008·Proceedings of the National Academy of Sciences of the United States of America·Yunming LongYao-Guang Liu
Dec 23, 2008·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Vera S BogdanovaOleg E Kosterin
Jan 5, 2010·Cell Research·Frédérick Masson, Gabrielle T Belz
Mar 3, 2010·Annual Review of Plant Biology·Kirsten Bomblies
Jul 14, 2010·Trends in Genetics : TIG·Norman A Johnson
Oct 28, 2010·Genome Research·Alan M MageeKenneth H Wolfe
Nov 5, 2010·Proceedings of the National Academy of Sciences of the United States of America·Yoko MizutaNori Kurata
Jan 10, 2012·Doklady Biological Sciences : Proceedings of the Academy of Sciences of the USSR, Biological Sciences Sections·A K Yadrikhinskiy, V S Bogdanova
Feb 10, 2012·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Vera S BogdanovaOleg E Kosterin
Mar 27, 2012·Briefings in Bioinformatics·Iain MilneDavid Marshall
Aug 8, 2012·Cellular and Molecular Life Sciences : CMLS·Liang Tong
May 4, 2013·Annual Review of Plant Biology·Yidan Ouyang, Qifa Zhang
Jun 1, 1995·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·M L Badenes, D E Parfitt

❮ Previous
Next ❯

Citations

Jun 25, 2016·Genome Biology·Henry DaniellWan-Jung Chang
Dec 21, 2018·The Plant Journal : for Cell and Molecular Biology·Alissa M WilliamsDaniel B Sloan
Oct 22, 2016·Genetics·Kate RockenbachDaniel B Sloan
May 4, 2018·Frontiers in Plant Science·Norman F Weeden
Mar 6, 2019·Proceedings of the National Academy of Sciences of the United States of America·Johanna SobanskiStephan Greiner
Jun 14, 2020·Plant Molecular Biology·Túlio Gomes PachecoMarcelo Rogalski
Mar 9, 2021·Molecular Phylogenetics and Evolution·Vera S BogdanovaGennadiy V Vasiliev
May 29, 2021·The Plant Cell·Arkadiusz ZupokStephan Greiner

❮ Previous
Next ❯

Datasets Mentioned

BETA
LK056924

Methods Mentioned

BETA
Chip
chips
PCR
genotyping

Software Mentioned

CAPS
MIRA
Tablet
Mapmaker
MIRA4
accD

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

© 2021 Meta ULC. All rights reserved