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NxTrim: optimized trimming of Illumina mate pair reads

bioRxiv

Aug 6, 2014

Jared Michael O'ConnellAnthony J. Cox

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Abstract

Motivation: Mate pair protocols add to the utility of paired-end sequencing by boosting the genomic distance spanned by each pair of reads, potentially allowing larger repeats to be bridged and resolved. The Illumina Nextera Mate Pair (NMP) protocol employs a circularisation-based strat...read more

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  • NxTrim: optimized trimming of Illumina mate pair reads

    bioRxiv

    Aug 6, 2014

    Jared Michael O'ConnellAnthony J. Cox

    PMID: 990007666

    DOI: 10.1101/007666

    Abstract

    Motivation: Mate pair protocols add to the utility of paired-end sequencing by boosting the genomic distance spanned by each pair of reads, potentially allowing larger repeats to be bridged and resolved. The Illumina Nextera Mate Pair (NMP) protocol employs a circularisation-based strat...read more

    Mentioned in this Paper

    Genome, Bacterial
    Plant Leaves
    Genome Sequencing
    Genome
    Bio-Informatics
    23
    1
    Paper Details
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