Palaeogenomics of plants: synteny-based modelling of extinct ancestors

Trends in Plant Science
Michael AbroukJérome Salse

Abstract

In the past ten years, international initiatives have led to the development of large sets of genomic resources that allow comparative genomic studies between plant genomes at a high level of resolution. Comparison of map-based genomic sequences revealed shared intra-genomic duplications, providing new insights into the evolution of flowering plant genomes from common ancestors. Plant genomes can be presented as concentric circles, providing a new reference for plant chromosome evolutionary relationships and an efficient tool for gene annotation and cross-genome markers development. Recent palaeogenomic data demonstrate that whole-genome duplications have provided a motor for the evolutionary success of flowering plants over the last 50-70 million years.

Citations

Mar 13, 2014·BMC Genomics·Rongzhi ZhangJerome Salse
Jun 8, 2014·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Zhenzhong WangZhiyong Liu
Jan 13, 2015·BMC Genomics·Eric C H Chen, David Sankoff
Mar 12, 2013·Functional & Integrative Genomics·Loai M AlnemerShahryar F Kianian
Oct 22, 2011·Journal of Experimental Botany·F GuillonB Dubreucq
Jan 6, 2012·Nucleic Acids Research·Yupeng WangAndrew H Paterson
Aug 7, 2012·Journal of Experimental Botany·Céline CharonYves Henry
Dec 28, 2010·Nature Genetics·Xavier ArgoutClaire Lanaud
Nov 28, 2012·Nature Genetics·Qiang XuYijun Ruan
Jun 21, 2011·Bioinformatics·Haris GavranovićEric Tannier
Aug 31, 2012·BMC Plant Biology·Catherine BodénèsChristophe Plomion
Sep 9, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Cristina SilvarFrank Ordon
Aug 9, 2011·Molecular Biotechnology·Delfina BarabaschiLuigi Cattivelli
Aug 7, 2013·Nature Communications·Ibrahim S Al-MssallemJun Yu
Jul 27, 2012·Genome Biology and Evolution·Florent MuratJérôme Salse
Jan 28, 2012·Current Opinion in Plant Biology·Jérôme Salse
May 20, 2011·Trends in Genetics : TIG·Ingo Schubert, Martin A Lysak
Mar 8, 2011·Comptes rendus biologies·Jérôme Salse, Catherine Feuillet
Jun 29, 2011·The New Phytologist·Scott A JacksonRandy Shoemaker
Mar 30, 2011·The Plant Journal : for Cell and Molecular Biology·Sebastian ProostYves Van de Peer
Jan 22, 2011·The Plant Journal : for Cell and Molecular Biology·Umar Masood QuraishiJerome Salse
Oct 17, 2013·The Plant Journal : for Cell and Molecular Biology·Luming YangYiqun Weng
Jan 22, 2015·The Plant Journal : for Cell and Molecular Biology·Pingzhi WuGuojiang Wu
Mar 24, 2016·BioMed Research International·Yiqing XuNing Ye
Oct 14, 2014·Frontiers in Plant Science·Kenji FujinoKoji Sato
Jul 16, 2014·Frontiers in Plant Science·Natalia Pabón-MoraBarbara A Ambrose

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.