DOI: 10.1101/483305Dec 4, 2018Paper

pdb-tools: a swiss army knife for molecular structures

BioRxiv : the Preprint Server for Biology
João P.G.L.M. RodriguesAlexandre M J J Bonvin

Abstract

The pdb-tools are a collection of Python scripts for working with molecular structure data in the PDB format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The pdb-tools are implemented in Python, without any external dependencies, and are freely available under the open-source Apache License at https://github.com/haddocking/pdb-tools/ and on PyPI (https://pypi.org/project/pdb-tools/).

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