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Phylogenetic tree shapes resolve disease transmission patterns

bioRxiv

Mar 5, 2014

Jennifer Leigh Gardy, Caroline Colijn

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Abstract

Background and Objectives: Whole genome sequencing is becoming popular as a tool for understanding outbreaks of communicable diseases, with phylogenetic trees being used to iden- tify individual transmission events or to characterize outbreak-level overall transmission dynamics. Existin...read more

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Disease Management
Communicable Diseases
Whole Genome Sequencing
Epidemiology
Genome
Classification
Patterns
Structure
Inference
Trees (plant)
9
5
Paper Details
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  • Phylogenetic tree shapes resolve disease transmission patterns

    bioRxiv

    Mar 5, 2014

    Jennifer Leigh Gardy, Caroline Colijn

    PMID: 990003194

    DOI: 10.1101/003194

    Abstract

    Background and Objectives: Whole genome sequencing is becoming popular as a tool for understanding outbreaks of communicable diseases, with phylogenetic trees being used to iden- tify individual transmission events or to characterize outbreak-level overall transmission dynamics. Existin...read more

    Mentioned in this Paper

    Disease Management
    Communicable Diseases
    Whole Genome Sequencing
    Epidemiology
    Genome
    9
    5
    Paper Details
    References
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