Physiological and transcriptomic responses to fishmeal-based diet and rapeseed meal-based diet in two strains of gibel carp (Carassius gibelio)

Fish Physiology and Biochemistry
Wenjie XuShouqi Xie

Abstract

The present study investigated differences in the utilization of fishmeal (FM) and rapeseed meal (RM) by gibel carp (Carassius gibelio) and explored the effects of protein sources on the responses of different genotypes. Gibel carp strains A (4.12 ± 0.03 g) and F (3.47 ± 0.00 g) were fed FM diet or RM diet for 56 days, and after which, growth performance, body composition, hematologic indices, and hepatic transcriptomes were measured. The effects of strain and diet on growth performance, body composition, and hematologic indices were analyzed by two-way analysis of covariance (ANCOVA). The results revealed that total replacement of FM with RM caused poor growth and feed utilization in both strains as well as the existence of genotype-diet interactions. Strain A showed better growth performance than strain F in the FM group, while the strain F grew better than strain A in the RM group. Transcriptomic analysis showed that the three main biological processes affected by the RM diet were amino acid metabolism, lipid metabolism, and digestive system. The different responses to the RM diet between strains were involved in amino acid metabolism, immune responses, and lipid metabolism. Identifying the underlying mechanisms by which dif...Continue Reading

References

Oct 6, 1997·The Journal of Nutrition·D R Korver, K C Klasing
Feb 7, 1998·Proceedings of the National Academy of Sciences of the United States of America·Y BoirieB Beaufrère
Nov 4, 2000·Biochimica Et Biophysica Acta·L Lögdberg, L Wester
Mar 2, 2002·Journal of Biochemistry·Makoto Murakami, Ichiro Kudo
Nov 28, 2002·Nature Genetics·John Quackenbush
Jan 25, 2003·Annual Review of Biochemistry·David W Russell
Nov 25, 2003·Prostaglandins & Other Lipid Mediators·David SacerdotiJohn C McGiff
Mar 26, 2004·Prostaglandins, Leukotrienes, and Essential Fatty Acids·Christina C Leslie
Dec 22, 2004·Archives of Otolaryngology--head & Neck Surgery·Joseph VandermeerRobert P Schleimer
Nov 30, 2006·Current Opinion in Hematology·Matthew J Christopher, Daniel C Link
Aug 6, 2008·The British Journal of Nutrition·Gabrielle VenturaChristophe Moinard
Feb 6, 2010·Genome Biology·Matthew D YoungAlicia Oshlack
May 17, 2011·Nature Biotechnology·Manfred G GrabherrAviv Regev
Dec 27, 2011·Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology·Sofia MoraisJ Gordon Bell
Apr 4, 2012·Annals of the Rheumatic Diseases·Anthony Cerami
Dec 4, 2012·International Journal of Molecular Sciences·Lei GaoWeidong Liu
Apr 1, 1996·Fish Physiology and Biochemistry·T C Kaczanowski, F W Beamish

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Datasets Mentioned

BETA
GSE106551

Methods Mentioned

BETA
RNA-Seq
PCR
deamination

Software Mentioned

Trinity
BLAST
TrEMBL
SPSS
Blast2GO
EdgeR ( Empirical Analysis of Digital Gene Expression Data in R

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