Plant phenotyping: from bean weighing to image analysis

Plant Methods
Achim WalterAndreas Hund

Abstract

Plant phenotyping refers to a quantitative description of the plant's anatomical, ontogenetical, physiological and biochemical properties. Today, rapid developments are taking place in the field of non-destructive, image-analysis -based phenotyping that allow for a characterization of plant traits in high-throughput. During the last decade, 'the field of image-based phenotyping has broadened its focus from the initial characterization of single-plant traits in controlled conditions towards 'real-life' applications of robust field techniques in plant plots and canopies. An important component of successful phenotyping approaches is the holistic characterization of plant performance that can be achieved with several methodologies, ranging from multispectral image analyses via thermographical analyses to growth measurements, also taking root phenotypes into account.

References

Apr 27, 2001·Environmental and Experimental Botany·M G. JohnsonM J. Storm
Sep 1, 1995·Plant Physiology·J. Lynch
Jun 5, 2004·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·A HundP Stamp
Jul 16, 2005·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Jinming ZhuJonathan P Lynch
Jan 21, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Oldrich ChloupekWilliam T B Thomas
Sep 5, 2006·Trends in Plant Science·Nicolas Schauer, Alisdair R Fernie
Aug 31, 2007·Plant, Cell & Environment·Bernhard BiskupUwe Rascher
Sep 8, 2007·Trends in Plant Science·Sophie de DorlodotXavier Draye
May 1, 2008·Annual Review of Plant Biology·Neil R Baker
Dec 5, 2008·Plant, Cell & Environment·Karthika RajendranStuart J Roy
Apr 28, 2009·The Plant Journal : for Cell and Molecular Biology·Siegfried JahnkeUlrich Schurr
Sep 18, 2009·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Samuel TrachselAndreas Hund
Jan 7, 2010·Journal of Experimental Botany·Saoirse R TracySacha J Mooney
Feb 4, 2010·Physical Chemistry Chemical Physics : PCCP·G OuyangS Z Liao
Mar 3, 2010·Annual Review of Plant Biology·Waltraud X Schulze, Björn Usadel
Jul 28, 2010·Journal of Experimental Botany·Bettina BergerMark Tester
Nov 19, 2010·Nature Reviews. Genetics·David HouleStig Omholt
Apr 23, 2011·Journal of Experimental Botany·Marta S LopesChristine H Foyer
May 3, 2011·Current Opinion in Plant Biology·Jinming ZhuTedd Elich
May 17, 2011·BMC Bioinformatics·Anja HartmannFalk Schreiber
Nov 15, 2011·Trends in Plant Science·Robert T Furbank, Mark Tester
Aug 29, 2012·Journal of Integrative Plant Biology·Jill E CairnsJose Luis Araus
Sep 18, 2012·PloS One·Helen DownieLionel X Dupuy
Oct 3, 2012·Journal of Experimental Botany·Ralf C DietrichPhilip J White
Mar 5, 2013·Annual Review of Plant Biology·Fabio Fiorani, Ulrich Schurr
Mar 9, 2013·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Joshua N CobbSusan McCouch
Mar 16, 2013·Annals of Botany·R C DietrichP J White
Apr 20, 2013·Journal of Experimental Botany·J Miguel CostaM Manuela Chaves
Oct 22, 2013·Trends in Plant Science·José Luis Araus, Jill E Cairns
Nov 14, 2013·PloS One·Brigitte CourtoisMichael Dingkuhn
Feb 19, 2014·Sensors·Stefan PaulusHeiner Kuhlmann
Apr 8, 2014·Plant Physiology·Patompong SaengwilaiJonathan Paul Lynch

❮ Previous
Next ❯

Citations

Apr 3, 2016·Journal of Experimental Botany·Matthias WissuwaTerry J Rose
Jul 29, 2015·The Arabidopsis Book·Hannes VanhaerenDirk Inzé
Jun 30, 2016·Sensors·Paweł DrapikowskiJustyna Wiland-Szymańska
Aug 16, 2016·The Science of the Total Environment·Oksana SytarXiaolan He
Sep 15, 2016·Zeitschrift Für Naturforschung. C, a Journal of Biosciences·Matilde BarónMaría Luisa Pérez-Bueno
Apr 4, 2018·Sensors·Dionisio AndújarJosé Dorado
May 18, 2018·American Journal of Botany·Ulrich Kutschera, Karl J Niklas
Mar 10, 2016·Scientific Reports·Mirwaes WahabzadaKristian Kersting
Oct 16, 2019·Journal of Experimental Botany·Justyna Jadwiga OlasFederico Apelt
Jan 9, 2020·Journal of Experimental Botany·Silvere Vialet-Chabrand, Tracy Lawson
Jan 3, 2020·Machine Vision and Applications·John AtanboriTony P Pridmore
Mar 13, 2020·Plant Biotechnology Journal·Wolfram WeckwerthRajeev K Varshney
Jul 25, 2017·Frontiers in Plant Science·Jordan R Ubbens, Ian Stavness
Aug 29, 2018·Annual Review of Phytopathology·A-K MahleinA Walter
Jun 20, 2019·Frontiers in Plant Science·Chunjiang ZhaoJiangchuan Fan
Dec 13, 2016·Protoplasma·Irene L Gügel, Jürgen Soll
Jun 13, 2017·Annual Review of Analytical Chemistry·Seon-Yeong KwakMichael S Strano
Mar 1, 2019·Frontiers in Plant Science·Karim PanjvaniKhan A Wahid

❮ Previous
Next ❯

Methods Mentioned

BETA
environmental stresses

Software Mentioned

SmartRoot
WinRhizo
REST ( Root Estimator for Shovelomics Traits )

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.