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Prediction of contact residue pairs based on co-substitution between sites in protein structures

PloS One

Jan 24, 2013

Sanzo Miyazawa

Abstract

Residue-residue interactions that fold a protein into a unique three-dimensional structure and make it play a specific function impose structural and functional constraints in varying degrees on each residue site. Selective constraints on residue sites are recorded in amino acid orders ...read more

Mentioned in this Paper

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Amino Acids, I.V. solution additive
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Menopause
Sample Fixation
Integral to Membrane
Thioredoxins
Etiology
Universal Protein Resource
Trypsin
1
43
Paper Details
References
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  • References66
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Prediction of contact residue pairs based on co-substitution between sites in protein structures

PloS One

Jan 24, 2013

Sanzo Miyazawa

PMID: 23342110

DOI: 10.1371/journal.pone.0054252

Abstract

Residue-residue interactions that fold a protein into a unique three-dimensional structure and make it play a specific function impose structural and functional constraints in varying degrees on each residue site. Selective constraints on residue sites are recorded in amino acid orders ...read more

Mentioned in this Paper

Protein Family
Amino Acids, I.V. solution additive
Metagenome
Menopause
Sample Fixation
Integral to Membrane
Thioredoxins
Etiology
Universal Protein Resource
Trypsin
1
43

Similar Papers Found In These Feeds

Cadherins and Catenins

Cadherins (named for "calcium-dependent adhesion") are a type of cell adhesion molecule (CAM) that is important in the formation of adherens junctions to bind cells with each other. Catenins are a family of proteins found in complexes with cadherin cell adhesion molecules of animal cells: alpha-catenin can bind to β-catenin and can also bind actin. β-catenin binds the cytoplasmic domain of some cadherins. Discover the latest research on cadherins and catenins here.

Adhesion Molecules in Health and Disease

Cell adhesion molecules are a subset of cell adhesion proteins located on the cell surface involved in binding with other cells or with the extracellular matrix in the process called cell adhesion. In essence, cell adhesion molecules help cells stick to each other and to their surroundings. Cell adhesion is a crucial component in maintaining tissue structure and function. Discover the latest research on adhesion molecule and their role in health and disease here.

Related Papers

Briefings in Bioinformatics

Correlated substitution analysis and the prediction of amino acid structural contacts

Briefings in BioinformaticsNovember 15, 2007
David S HornerGraziano Pesole
Paper Details
References
  • References66
  • Citations3
12345...
  • References66
  • Citations3
1
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