Probable reassortment of genomic elements among elongated RNA-containing plant viruses

Journal of Molecular Evolution
Morozov SYuJ G Atabekov

Abstract

The relationships of genome organization among elongated (rod-shaped and filamentous) plant viruses have been analyzed. Sequences in coding and noncoding regions of barley stripe mosaic virus (BSMV) RNAs 1, 2, and 3 were compared with those of the monopartite RNA genomes of potato virus X (PVX), white clover mosaic virus (WClMV), and tobacco mosaic virus, the bipartite genome of tobacco rattle virus (TRV), the quadripartite genome of beet necrotic yellow vein virus (BNYVV), and icosahedral tricornaviruses. These plant viruses belong to a supergroup having 5'-capped genomic RNAs. The results suggest that the genomic elements in each BSMV RNA are phylogenetically related to those of different plant RNA viruses. RNA 1 resembles the corresponding RNA 1 of tricornaviruses. The putative proteins encoded in BSMV RNA 2 are related to the products of BNYVV RNA 2, PVX RNA, and WClMV RNA. Amino acid sequence comparisons suggest that BSMV RNA 3 resembles TRV RNA 1. Also, it can be proposed that in the case of monopartite genomes, as a rule, every gene or block of genes retains phylogenetic relationships that are independent of adjacent genomic elements of the same RNA. Such differential evolution of individual elements of one and the same ...Continue Reading

References

Jul 1, 1978·Nucleic Acids Research·N SonenbergR M Goodman
May 5, 1988·Nature·A E GorbalenyaV M Blinov
Aug 11, 1988·Nucleic Acids Research·A E Gorbalenya, E V Koonin
Jan 30, 1986·Biochimica Et Biophysica Acta·J K Mohana Rao, P Argos
Mar 1, 1986·Journal of Virology·S MakinoM M Lai
Nov 7, 1986·Cell·K Kirkegaard, D Baltimore
Apr 1, 1987·Proceedings of the National Academy of Sciences of the United States of America·T E DeverW C Merrick
Sep 1, 1987·BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology·M G Rossmann
Jan 11, 1988·Nucleic Acids Research·R L ForsterR C Gardner
May 5, 1988·Nature·T C Hodgman
Jul 11, 1988·Nucleic Acids Research·W A MillerW L Gerlach
Aug 12, 1988·Cell·L P FreedmanP B Sigler
Mar 1, 1986·Proceedings of the National Academy of Sciences of the United States of America·V Volloch
Oct 1, 1987·The Journal of General Virology·W D HamiltonD C Baulcombe
Jan 1, 1985·Annual Review of Microbiology·R E Matthews
Jan 14, 1986·Biochemical and Biophysical Research Communications·J K Mohana Rao
Mar 11, 1986·Nucleic Acids Research·B J CornelissenJ F Bol
Jun 1, 1981·Proceedings of the National Academy of Sciences of the United States of America·T P Hopp, K R Woods
Jan 1, 1982·Progress in Nucleic Acid Research and Molecular Biology·A L HaenniF Chapeville
Jun 1, 1983·Proceedings of the National Academy of Sciences of the United States of America·S S Monroe, S Schlesinger
Oct 15, 1984·Journal of Molecular Biology·D EisenbergR Wall
Jul 1, 1984·Proceedings of the National Academy of Sciences of the United States of America·J HaseloffP Kaesberg
Oct 1, 1982·Proceedings of the National Academy of Sciences of the United States of America·P GoeletJ Karn
Nov 25, 1981·Journal of Molecular Biology·P AhlquistP Kaesberg
Jan 1, 1983·Proceedings of the National Academy of Sciences of the United States of America·H Fraenkel-Conrat
Nov 1, 1984·Plant Molecular Biology·B J Cornelissen, J F Bol

❮ Previous
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Citations

Dec 3, 2005·Nature Reviews. Microbiology·Marilyn J Roossinck
Dec 1, 1991·Proceedings of the National Academy of Sciences of the United States of America·E V KooninJ C Carrington
Oct 1, 1992·Proceedings of the National Academy of Sciences of the United States of America·V P BoykoV V Dolja
Oct 25, 1994·Proceedings of the National Academy of Sciences of the United States of America·D L BeckR L Forster
Apr 23, 1999·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·A Gibbs
Jan 1, 1997·Annual Review of Phytopathology·M J Roossinck
Nov 10, 2001·Annual Review of Phytopathology·A CallawayS A Lommel
Mar 17, 2007·Annual Review of Phytopathology·Giovanni P MartelliValerian V Dolja
Mar 30, 2012·Archives of Virology·Priscilla de Sousa Geraldino DuarteAntonia Dos Reis Figueira
Jun 1, 2000·Molecular Plant-microbe Interactions : MPMI·Y YangJ Verchot
Sep 5, 2006·FEBS Letters·Daria V RakitinaNatalia O Kalinina
Mar 24, 2006·The Plant Journal : for Cell and Molecular Biology·Andrey A ZamyatninEugene I Savenkov
Sep 1, 1990·Virology·U Niesbach-KlösgenK Richards
Dec 1, 1990·Virology·I T Petty, A O Jackson
Feb 13, 2001·The Journal of General Virology·O FedorkinS Yu Morozov
Aug 29, 2012·Biochemical and Biophysical Research Communications·Xianchao Sun, Chaozheng Zhang
May 8, 2015·Current Opinion in Virology·Ming-Ru LiouYau-Heiu Hsu
Sep 14, 2010·Molecular Plant-microbe Interactions : MPMI·Jeanmarie Verchot-LubiczDavid Gilmer

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