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PROCOV: maximum likelihood estimation of protein phylogeny under covarion models and site-specific covarion pattern analysis

BMC Evolutionary Biology

Sep 10, 2009

Huai-Chun WangAndrew J Roger

Abstract

The covarion hypothesis of molecular evolution holds that selective pressures on a given amino acid or nucleotide site are dependent on the identity of other sites in the molecule that change throughout time, resulting in changes of evolutionary rates of sites along the branches of a ph...read more

Mentioned in this Paper

HSPD1 gene
Heat-Shock Proteins 70
Derivatives
ras Oncogene
Likelihood Functions
Reticular Activating System
Amino Acids, I.V. solution additive
Genes, Viral
Archaea
Phylogeny
Paper Details
References
  • References51
  • Citations8
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PROCOV: maximum likelihood estimation of protein phylogeny under covarion models and site-specific covarion pattern analysis

BMC Evolutionary Biology

Sep 10, 2009

Huai-Chun WangAndrew J Roger

PMID: 19737395

DOI: 10.1186/1471-2148-9-225

Abstract

The covarion hypothesis of molecular evolution holds that selective pressures on a given amino acid or nucleotide site are dependent on the identity of other sites in the molecule that change throughout time, resulting in changes of evolutionary rates of sites along the branches of a ph...read more

Mentioned in this Paper

HSPD1 gene
Heat-Shock Proteins 70
Derivatives
ras Oncogene
Likelihood Functions
Reticular Activating System
Amino Acids, I.V. solution additive
Genes, Viral
Archaea
Phylogeny

Related Papers

Paper Details
References
  • References51
  • Citations8
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