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Prodigal: prokaryotic gene recognition and translation initiation site identification

BMC Bioinformatics

Mar 10, 2010

Doug HyattLoren Hauser

Abstract

The quality of automated gene prediction in microbial organisms has improved steadily over the past decade, but there is still room for improvement. Increasing the number of correct identifications, both of genes and of the translation initiation sites for each gene, and reducing the ov...read more

Mentioned in this Paper

Pseudomonas aeruginosa (antigen)
Haemophilus influenzae
Meningitis, Haemophilus
Genome
Escherichia coli K12
Ncbi Taxonomy
Codon, Terminator
Archaea
Computer Programs and Programming
Codon, Initiator
2
1898
1
Paper Details
References
  • References20
  • Citations1717
12
  • References20
  • Citations1717
12345...

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Prodigal: prokaryotic gene recognition and translation initiation site identification

BMC Bioinformatics

Mar 10, 2010

Doug HyattLoren Hauser

PMID: 20211023

DOI: 10.1186/1471-2105-11-119

Abstract

The quality of automated gene prediction in microbial organisms has improved steadily over the past decade, but there is still room for improvement. Increasing the number of correct identifications, both of genes and of the translation initiation sites for each gene, and reducing the ov...read more

Mentioned in this Paper

Pseudomonas aeruginosa (antigen)
Haemophilus influenzae
Meningitis, Haemophilus
Genome
Escherichia coli K12
Ncbi Taxonomy
Codon, Terminator
Archaea
Computer Programs and Programming
Codon, Initiator
2
1898
1

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Structure and Function of DNA

The double helix structure of DNA is important for its biological function. Discover the latest research on the Structure and Function of DNA here.

Archaeogenetics

Recent advances in genomic sequencing has led to the discovery of new strains of Archaea and shed light on their evolutionary history. Discover the latest research on Archaeogenetics here.

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Identifying bacterial genes and endosymbiont DNA with Glimmer

BioinformaticsJanuary 24, 2007
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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

Nucleic Acids ResearchApril 25, 2007
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Paper Details
References
  • References20
  • Citations1717
12
  • References20
  • Citations1717
12345...

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