Programmable DNA switches and their applications

Nanoscale
Scott G HarrounAlexis Vallée-Bélisle

Abstract

DNA switches are ideally suited for numerous nanotechnological applications, and increasing efforts are being directed toward their engineering. In this review, we discuss how to engineer these switches starting from the selection of a specific DNA-based recognition element, to its adaptation and optimisation into a switch, with applications ranging from sensing to drug delivery, smart materials, molecular transporters, logic gates and others. We provide many examples showcasing their high programmability and recent advances towards their real life applications. We conclude with a short perspective on this exciting emerging field.

References

Mar 1, 1995·International Journal of Hyperthermia : the Official Journal of European Society for Hyperthermic Oncology, North American Hyperthermia Group·K EnginJ D McFarlane
Mar 1, 1996·Nature Biotechnology·S Tyagi, F R Kramer
Aug 26, 1998·Nature·E WinfreeN C Seeman
Sep 3, 1998·Analytical Chemistry·R A PotyrailoG M Hieftje
Jan 19, 2000·Molecular Medicine Today·M StubbsC L Bashford
Jul 11, 2001·Analytical Biochemistry·N HamaguchiM Stanton
Jul 18, 2001·Journal of the American Chemical Society·M N StojanovicD W Landry
May 4, 2002·Nature Reviews. Molecular Cell Biology·Igor V Shevelev, Ulrich Hübscher
Apr 17, 2003·Journal of the American Chemical Society·Razvan Nutiu, Yingfu Li
Jun 26, 2003·Nucleic Acids Research·Michael Zuker
Jul 18, 2003·Proceedings of the National Academy of Sciences of the United States of America·Chunhai FanAlan J Heeger
Aug 19, 2003·Nature Biotechnology·Milan N Stojanovic, Darko Stefanovic
Oct 14, 2004·Journal of the American Chemical Society·Yi Chen, Chengde Mao
Oct 20, 2004·Proceedings of the National Academy of Sciences of the United States of America·Robert M Dirks, Niles A Pierce
Nov 15, 2005·Proceedings of the National Academy of Sciences of the United States of America·Diana Y VargasSanjay Tyagi
Dec 22, 2005·Journal of the American Chemical Society·Yi XiaoAlan J Heeger
Feb 16, 2006·Journal of the American Chemical Society·Yoko MiyakeAkira Ono
May 9, 2006·Current Opinion in Chemical Biology·Naveen K Navani, Yingfu Li
Oct 19, 2006·Journal of the American Chemical Society·Maya ZayatsItamar Willner
Nov 9, 2006·Nano Letters·Joanne MacdonaldMilan N Stojanovic
Nov 30, 2006·Molecular Systems Biology·Diane Longo, Jeff Hasty
Jun 30, 2007·Angewandte Chemie·Itamar Willner, Maya Zayats
Oct 3, 2007·The AAPS Journal·John W A Findlay, Robert F Dillard
Nov 14, 2007·Nano Letters·David A GiljohannChad A Mirkin
Feb 26, 2008·Journal of the American Chemical Society·Weian ZhaoYingfu Li
May 9, 2008·Chemical Communications : Chem Comm·Chi-Wei LiuHuan-Tsung Chang
May 31, 2008·Nature Methods·Rahul RoyTaekjip Ha
Jul 26, 2008·Nature Nanotechnology·Jonathan Bath, Andrew J Turberfield
Aug 6, 2008·Journal of the American Chemical Society·Zhiwen TangWeihong Tan
Oct 3, 2008·Chemical Communications : Chem Comm·Akira OnoYoshiyuki Tanaka
Oct 22, 2008·Journal of Molecular Biology·Nicolas E Buchler, Matthieu Louis
Feb 18, 2009·Analytical Chemistry·Chi-Wei LiuHuan-Tsung Chang
Mar 24, 2009·FEBS Letters·Roman A LaskowskiJanet M Thornton
May 8, 2009·Nature Nanotechnology·Souvik ModiYamuna Krishnan
May 9, 2009·Nature·Ebbe S AndersenJørgen Kjems
May 21, 2009·Molecular Systems Biology·Nicolas E Buchler, Frederick R Cross
Jun 9, 2009·Nano Letters·Huaizhi KangWeihong Tan
Jun 26, 2009·Journal of the American Chemical Society·Xiaoyin XiaoAllen J Bard

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Citations

Oct 31, 2018·The Analyst·Philip GillespieDanny O'Hare
Oct 18, 2018·Chemistry : a European Journal·Shu YangQianfan Yang
Jan 27, 2019·Angewandte Chemie·Michael P O'HaganM Carmen Galan
Aug 1, 2019·Chembiochem : a European Journal of Chemical Biology·Jiahui FanZhou Nie
Nov 9, 2019·Nature Communications·Brandon D WilsonH Tom Soh
May 20, 2020·Chemistry : a European Journal·Marianna RossettiAlessandro Porchetta
Jun 12, 2019·BMC Bioinformatics·Yanan WangYafei Dong
Oct 23, 2019·Nature Reviews. Genetics·Hamid Ramezani, Hendrik Dietz
Jun 14, 2020·Nature Communications·Kevin N LinAlbert J Keung
Jul 10, 2020·Nucleic Acids Research·Yingxin HuLinqiang Pan
Oct 1, 2020·Angewandte Chemie·Obianuju A NwokoloIrina V Nesterova
Dec 22, 2020·Current Pollution Reports·Vineet Kumar, Praveen Guleria
Nov 17, 2020·Frontiers in Medicine·Ya DiLiming Gao
Nov 17, 2020·Frontiers in Chemistry·Fan XuPengfei Wang
Jan 13, 2021·Chembiochem : a European Journal of Chemical Biology·Andrey Giovanni Gomes de OliveiraDmitry M Kolpashchikov
Jan 28, 2021·Chemistry : a European Journal·Liqi WanPei Guo
Jun 11, 2021·Analytical and Bioanalytical Chemistry·Annelies DillenJeroen Lammertyn
Dec 17, 2020·Journal of the American Chemical Society·Liang YueItamar Willner
Nov 5, 2020·Analytical Chemistry·Andresa B BezerraChristopher J Easley
Jun 7, 2018·Analytical Chemistry·Marianna RossettiAlessandro Porchetta
Dec 2, 2020·ACS Applied Materials & Interfaces·Sangwoo HanJong Bum Lee
Nov 3, 2020·ACS Nano·Yifan ZhangYu-Cheng Chen
Jun 28, 2019·Accounts of Chemical Research·Dmitry M Kolpashchikov
Dec 7, 2018·Analytical Chemistry·Simona RanalloFrancesco Ricci
Aug 28, 2021·Analytical Chemistry·Jingxin LiuShuangchen Ruan
Oct 9, 2021·Signal Transduction and Targeted Therapy·Wenjuan MaYunfeng Lin
Nov 19, 2021·Chemical Society Reviews·Angela F De FazioAntonios G Kanaras
Jan 4, 2022·Analytical and Bioanalytical Chemistry·Jing Li, Xiaojiang Xie

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Methods Mentioned

BETA
fluorescence spectroscopy
biosensing
FRET
biosensors
biosensor
PCR
BRET
chip
proximity ligation assay
imaging techniques

Software Mentioned

Mfold
DNA TetrNano
NUPACK

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