Proteomic Study of Aqueous Humor and Its Application in the Treatment of Neovascular Glaucoma

Frontiers in Molecular Biosciences
Mengxi YuChengyan He

Abstract

Aqueous humor (AH) proteins are involved in many physiological and pathological processes of the eye. The proteome analysis of AH is important to understand its physiological and pathophysiological functions. In the present study, AH samples obtained from 21 cataract volunteers were pooled together. After high-pH RPLC offline separation, the pooled sample was analyzed by LC-MS/MS to provide a comprehensive profile of AH proteome. The function analysis was provided by the GO and IPA annotation. In order to determine whether the AH proteome can reflect the pathophysiological changes of the disease, DIA technology was used to analyze the AH samples obtained from three neovascular glaucoma (NVG) patients (six samples) before and after drug treatment. The differential proteins were validated by PRM technology in an independent group (14 samples). In the AH proteome database, 802 proteins were identified, and 318 proteins were identified for the first time. Furthermore, 480 proteins were quantified based on the peak intensity-based semiquantification (iBAQ), which ranged by approximately 7 orders of magnitude. These proteins are primarily involved in immunity- and inflammation-related pathways. The differential AH proteomic analysis ...Continue Reading

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Citations

Aug 12, 2021·Nonlinear Dynamics·Zhenhua YuFatima Alam
Sep 2, 2021·Modeling Earth Systems and Environment·Ayesha SohailRobia Arif

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Methods Mentioned

BETA
ubiquitination

Software Mentioned

IPA
Spectronaut
cytoHubba
Proteome Discoverer
Spectronaut Pulsar
PANTHER
Skyline
Cytoscape
Progenesis
iProX

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