Proteomics analysis reveals marker proteins for minor vein initiation in rice leaf

Functional & Integrative Genomics
Dan FengXiao Han

Abstract

Leaf veins play a critical role in resource supplication and photosynthate translocation; thus, it is considered as an important agricultural trait for crop breeding. The rice minor veins are parallelly grown along all the parts of the leaf from base to tip. To understand the process of minor vein development, anatomy analysis was performed to reveal the initiation and development of minor veins in rice leaf. The frequency of minor vein initiation follows a decreased tendency from leaf base to tip. An iTRAQ-based proteomics analysis was performed in rice leaf sections. Photosynthesis- and carbon fixation-related proteins accumulated a high level in the middle part of leaves. Furthermore, marker proteins involved in sucrose degradation and starch synthesis were accumulated into initiation and mature parts of minor veins, respectively. It suggests a different source-sink activity in the initiation and mature parts of minor veins in terms of photosynthate translocation. The identified proteins are candidate markers for small vein initiation in rice leaves.

References

Jan 24, 2004·Journal of Experimental Botany·Sébastien BaudChristine Rochat
Jan 30, 2007·The Plant Journal : for Cell and Molecular Biology·Zuzanna BieniawskaAlison M Smith
Jan 10, 2009·Nature Protocols·Da Wei HuangRichard A Lempicki
Feb 18, 2009·Plant, Cell & Environment·Antonio Jesús SerratoMariam Sahrawy
Nov 3, 2010·Nature Genetics·Pinghua LiThomas P Brutnell
Jan 27, 2011·The Plant Journal : for Cell and Molecular Biology·Pil Joon SeoChung-Mo Park
Aug 26, 2011·The Journal of Biological Chemistry·Yi ZhengR Michael Garavito
Dec 21, 2011·Proceedings of the National Academy of Sciences of the United States of America·Edurne Baroja-FernándezJavier Pozueta-Romero
Jun 12, 2012·Journal of Experimental Botany·I R A SmillieE H Murchie
Nov 29, 2012·Nature Communications·Hugo Jan de BoerStefan C Dekker
Mar 7, 2013·Journal of Integrative Plant Biology·William J LucasPradeep Kachroo
Oct 15, 2013·Journal of Experimental Botany·Lawren SackLisa A Donovan
Apr 25, 2014·PloS One·Aryo B FeldmanWilliam P Quick
Oct 13, 2014·Nature Biotechnology·Lin WangThomas P Brutnell
Apr 29, 2015·Proceedings of the National Academy of Sciences of the United States of America·Chun-Ping YuWen-Hsiung Li
Sep 4, 2015·The Plant Journal : for Cell and Molecular Biology·Govinda RizalWilliam Paul Quick
Feb 2, 2016·Current Opinion in Plant Biology·Chi-Fa HuangWen-Hsiung Li
May 8, 2016·The Plant Journal : for Cell and Molecular Biology·Chaoyang HuWilliam J Lucas
Jun 2, 2016·Nature Plants·Zhaoliang ZhangWilliam J Lucas
Oct 30, 2016·Frontiers in Plant Science·Alex WuGraeme L Hammer

❮ Previous
Next ❯

Citations

Jan 31, 2021·Molecules : a Journal of Synthetic Chemistry and Natural Product Chemistry·Yan LiuZhiqiang Lv

❮ Previous
Next ❯

Datasets Mentioned

BETA
IPX00085400

Software Mentioned

Thermo Proteome Discoverer
R package
CRAN
GOEAST
iProx
R
STRING

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.