PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels

Bioinformatics
Yongwook Choi, Agnes P Chan

Abstract

We present a web server to predict the functional effect of single or multiple amino acid substitutions, insertions and deletions using the prediction tool PROVEAN. The server provides rapid analysis of protein variants from any organisms, and also supports high-throughput analysis for human and mouse variants at both the genomic and protein levels. The web server is freely available and open to all users with no login requirements at http://provean.jcvi.org. achan@jcvi.org Supplementary data are available at Bioinformatics online.

References

May 5, 2001·Genome Research·P C Ng, S Henikoff
Jul 11, 2006·Annual Review of Genomics and Human Genetics·Pauline C Ng, Steven Henikoff
Apr 1, 2010·Nature Methods·Ivan A AdzhubeiShamil R Sunyaev
Aug 19, 2011·Nature Reviews. Genetics·Gregory M Cooper, Jay Shendure
Oct 12, 2012·PloS One·Yongwook ChoiAgnes P Chan

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Citations

Apr 15, 2016·EBioMedicine·Theodora KatsilaGeorge P Patrinos
Jan 23, 2016·Genetic Testing and Molecular Biomarkers·Hana LjubićBoris Vucelić
Oct 6, 2015·Nature Genetics·Jing TanBin Tean Teh
Mar 20, 2016·Biochemical and Biophysical Research Communications·Rahma FelhiFaiza Fakhfakh
Apr 2, 2016·Biochemical and Biophysical Research Communications·Emna Mkaouar-RebaiFaiza Fakhfakh
Jun 13, 2015·ELife·Simon T HuiAldons J Lusis
May 10, 2016·Mitochondrial DNA. Part A. DNA Mapping, Sequencing, and Analysis·Adam L BrandtAlfred L Roca
Jun 14, 2016·Computational and Structural Biotechnology Journal·Theodora KatsilaMinos-Timotheos Matsoukas
Jul 5, 2016·Alcoholism, Clinical and Experimental Research·Franziska DegenhardtMarkus M Nöthen
Aug 11, 2016·Hereditary Cancer in Clinical Practice·Asta FörstiKari Hemminki
Jul 13, 2016·Genes, Chromosomes & Cancer·Marta CardosoManuel R Teixeira
Feb 19, 2016·Genetics in Medicine : Official Journal of the American College of Medical Genetics·Ogun AdebaliIgor B Zhulin
Oct 7, 2016·Journal of Human Genetics·Anaïs Fradet, Jamie Fitzgerald
Oct 6, 2016·European Journal of Human Genetics : EJHG·Luisa AzevedoDavid N Cooper
Oct 9, 2016·Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association·Maki MukawaHiroyuki Akagawa
Oct 28, 2016·Nature Genetics·Sameer AgnihotriGelareh Zadeh
Nov 8, 2016·Nature Chemical Biology·Josep V FormentStephen P Jackson
Jan 17, 2017·The New Phytologist·Peter Civáň, Terence A Brown
Jan 17, 2017·Expert Review of Molecular Diagnostics·Jeremy Davis-TurakGary Hardiman

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