Pseudomonas asiatica sp. nov., isolated from hospitalized patients in Japan and Myanmar

International Journal of Systematic and Evolutionary Microbiology
Mari TohyaTeruo Kirikae

Abstract

A novel Gram-negative, aerobic, rod-shaped, non-spore-forming bacterial strain, RYU5T, was isolated from a stool sample of an inpatient at a hospital in Okinawa, Japan. The optimal growth temperature of RYU5T was 30 °C. Phylogenetic analysis based on the sequences of housekeeping genes, including the 16S rRNA, rpoB, rpoD and gyrB genes, showed that RYU5T was a member of the Pseudomonas putida group and was located close to Pseudomonas monteilii and P. putida. Whole-genome comparisons, using average nucleotide identity and digital DNA-DNA hybridization, confirmed that strain RYU5T should be classified as a novel species of Pseudomonas. Phenotypic characterization tests showed that utilization of d-mannose, d-serine, l-arabinose and d-fructose could distinguish this strain from other related species of the genus Pseudomonas. Based on genetic and phenotypic evidence, strain RYU5T should be classified as a novel species, for which the name Pseudomonas asiatica sp. nov. is proposed. The type strain is RYU5T (=DSM 107182T, =JCM 32716T), with a DNA G+C content of 62.25 mol%.

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Citations

May 30, 2019·Antimicrobial Agents and Chemotherapy·Mari TohyaHtay Htay Tin
Jul 30, 2019·International Journal of Systematic and Evolutionary Microbiology·Jiayuan QinZhiyong Zong
Aug 2, 2019·International Journal of Systematic and Evolutionary Microbiology·Mari TohyaTeruo Kirikae
Jun 6, 2020·International Journal of Systematic and Evolutionary Microbiology·Mari TohyaHtay Htay Tin
Sep 3, 2020·International Journal of Systematic and Evolutionary Microbiology·Hiroyuki SawadaHarukuni Horita
Sep 29, 2019·Scientific Reports·Kohei OguraTohru Miyoshi-Akiyama

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