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QUAST: quality assessment tool for genome assemblies

Bioinformatics

Feb 21, 2013

Alexey A GurevichGlenn Tesler

Abstract

Limitations of genome sequencing techniques have led to dozens of assembly algorithms, none of which is perfect. A number of methods for comparing assemblers have been developed, but none is yet a recognized benchmark. Further, most existing methods for comparing assemblies are only app...read more

Mentioned in this Paper

Alkalescens-Dispar Group
Genome
Bio-Informatics
Genome Mapping
Computer Programs and Programming
Genomics
Sequence Determinations, DNA
Genome Sequencing
Genomic Structural Variation
Contig Mapping
38
2114
1
1
Paper Details
References
  • References16
  • Citations671
12
  • References16
  • Citations671
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QUAST: quality assessment tool for genome assemblies

Bioinformatics

Feb 21, 2013

Alexey A GurevichGlenn Tesler

PMID: 23422339

DOI: 10.1093/bioinformatics/btt086

Abstract

Limitations of genome sequencing techniques have led to dozens of assembly algorithms, none of which is perfect. A number of methods for comparing assemblers have been developed, but none is yet a recognized benchmark. Further, most existing methods for comparing assemblies are only app...read more

Mentioned in this Paper

Alkalescens-Dispar Group
Genome
Bio-Informatics
Genome Mapping
Computer Programs and Programming
Genomics
Sequence Determinations, DNA
Genome Sequencing
Genomic Structural Variation
Contig Mapping
38
2114
1
1

Similar Papers Found In These Feeds

Structural Variation Detection

Structural variations, such as insertions, deletions, inversions, and duplications, are a common feature in human genomes, and a number of studies have reported that such variations are associated with human diseases. Here is the latest research focusing on structural variation detection.


Related Papers

Bioinformatics

Mauve assembly metrics

BioinformaticsAugust 4, 2011
Aaron DarlingMarc T Facciotti
Paper Details
References
  • References16
  • Citations671
12
  • References16
  • Citations671
12345...
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