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Rapid de novo assembly of the European eel genome from nanopore sequencing reads

Scientific Reports

Aug 3, 2017

Hans J. JansenChristiaan V. Henkel

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Abstract

We have sequenced the genome of the endangered European eel using the MinION by Oxford Nanopore, and assembled these data using a novel algorithm specifically designed for large eukaryotic genomes. For this 860 Mbp genome, the entire computational process takes two days on a single CPU....read more

Mentioned in this Paper

Eels
Genome
Anguilla anguilla
Structure
Molecular Assembly/Self Assembly
Genomics
Sequence Determinations, DNA
Computational Molecular Biology
Nucleic Acid Sequencing
Sequencing
53
194
Paper Details
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Rapid de novo assembly of the European eel genome from nanopore sequencing reads

Scientific Reports

Aug 3, 2017

Hans J. JansenChristiaan V. Henkel

PMID: 28775309

DOI: 10.1038/s41598-017-07650-6

Abstract

We have sequenced the genome of the endangered European eel using the MinION by Oxford Nanopore, and assembled these data using a novel algorithm specifically designed for large eukaryotic genomes. For this 860 Mbp genome, the entire computational process takes two days on a single CPU....read more

Mentioned in this Paper

Eels
Genome
Anguilla anguilla
Structure
Molecular Assembly/Self Assembly
53
194
Paper Details
References
  • References
  • Citations9
  • References currently unavailable

    We're still populating references for this paper, please check back later.
  • References
  • Citations9
1

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