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Rapid de novo assembly of the European eel genome from nanopore sequencing reads

bioRxiv

Jan 20, 2017

Hans J. JansenChristiaan V. Henkel

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Abstract

We have sequenced the genome of the endangered European eel using the MinION by Oxford Nanopore, and assembled these data using a novel algorithm specifically designed for large eukaryotic genomes. For this 860 Mbp genome, the entire computational process takes two days on a single CPU....read more

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Genome
Structure
Molecular Assembly/Self Assembly
Anguilla anguilla
Nucleic Acid Sequencing
Genomics
Sequencing
Genome Assembly Sequence
115
2
60
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Rapid de novo assembly of the European eel genome from nanopore sequencing reads

bioRxiv

Jan 20, 2017

Hans J. JansenChristiaan V. Henkel

DOI: 10.1101/101907

Abstract

We have sequenced the genome of the endangered European eel using the MinION by Oxford Nanopore, and assembled these data using a novel algorithm specifically designed for large eukaryotic genomes. For this 860 Mbp genome, the entire computational process takes two days on a single CPU....read more

Mentioned in this Paper

Genome
Structure
Molecular Assembly/Self Assembly
Anguilla anguilla
Nucleic Acid Sequencing
115
2
60

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