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Read Depth Analysis to Identify CNV in Bacteria Using CNOGpro

Methods in Molecular Biology

Jan 1, 2018

Ola Brynildsrud

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Abstract

Whole-genome sequencing with short-read technologies is well suited for calling single nucleotide polymorphisms, but has major problems with the detection of structural variants larger than the read length. One such type of variation is copy number variation (CNV), which entails deletio...read more

Mentioned in this Paper

Genome, Bacterial
Genetic Technology
Genome Sequencing
Single Nucleotide Polymorphism
Positioning Attribute
Whole Genome Sequencing
Genome
Sequence Determinations, DNA
Gene Duplication
Choroidal Neovascularization
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Read Depth Analysis to Identify CNV in Bacteria Using CNOGpro

Methods in Molecular Biology

Jan 1, 2018

Ola Brynildsrud

PMID: 30039364

DOI: 10.1007/978-1-4939-8666-8_5

Abstract

Whole-genome sequencing with short-read technologies is well suited for calling single nucleotide polymorphisms, but has major problems with the detection of structural variants larger than the read length. One such type of variation is copy number variation (CNV), which entails deletio...read more

Mentioned in this Paper

Genome, Bacterial
Genetic Technology
Genome Sequencing
Single Nucleotide Polymorphism
Positioning Attribute
Paper Details
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