Mar 17, 2015

regionReport: Interactive reports for region-based analyses

BioRxiv : the Preprint Server for Biology
Leonardo Collado-TorresJeffrey T Leek

Abstract

regionReport is a R package for generating detailed interactive reports from regions of the genome. The report includes quality-control checks, an overview of the results, an interactive table of the genomic regions, and reproducibility information. regionReport can easily be expanded with report templates for other specialized analyses. In particular, regionReport has an extensive report template for exploring derfinder results from annotation-agnostic RNA-seq differential expression analyses. Availability regionReport is freely available via Bioconductor at [bioconductor.org/packages/release/bioc/html/regionReport.html][1]. [1]: https://bioconductor.org/packages/release/bioc/html/regionReport.html

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Mentioned in this Paper

Genome
Differential Diagnosis
Genomics
Analysis
Health Care

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