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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

Nucleic Acids Research

Apr 25, 2007

Karin LagesenD W Ussery

Abstract

The publication of a complete genome sequence is usually accompanied by annotations of its genes. In contrast to protein coding genes, genes for ribosomal RNA (rRNA) are often poorly or inconsistently annotated. This makes comparative studies based on rRNA genes difficult. We have there...read more

Mentioned in this Paper

Genome
Ribosomal RNA
Computer Programs and Programming
Genomics
Ribosomal RNA Location
Markov Chains
Genome, Bacterial
Computational Molecular Biology
Genes, rRNA
8
1116
2
Paper Details
References
  • References24
  • Citations2212
123
  • References24
  • Citations2212
12345...

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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

Nucleic Acids Research

Apr 25, 2007

Karin LagesenD W Ussery

PMID: 17452365

DOI: 10.1093/nar/gkm160

Abstract

The publication of a complete genome sequence is usually accompanied by annotations of its genes. In contrast to protein coding genes, genes for ribosomal RNA (rRNA) are often poorly or inconsistently annotated. This makes comparative studies based on rRNA genes difficult. We have there...read more

Mentioned in this Paper

Genome
Ribosomal RNA
Computer Programs and Programming
Genomics
Ribosomal RNA Location
Markov Chains
Genome, Bacterial
Computational Molecular Biology
Genes, rRNA
8
1116
2

Feeds With Similar Papers

Structural Biology: Biophysics

Structural Biology: Biophysics describes the study of structural biology using various biophysical techiniques such as imaging, computational modeling, etc. Discover the latest research on structrual biology here.

Non-coding Variants in Cancer (Keystone)

Mutations, single nucleotide variants and large genomic rearrangements in non-coding regions of the genome can have severe consequences such as disruption of transcription factor binding sites and functions of non-coding RNAs and can impact tumor development and progression. This feed focuses on the latest research on non-coding variants in cancer.

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Bioinformatics

Identifying bacterial genes and endosymbiont DNA with Glimmer

BioinformaticsJanuary 24, 2007
Arthur L DelcherS L Salzberg
Journal of Molecular Biology

Basic local alignment search tool

Journal of Molecular BiologyOctober 5, 1990
S F AltschulD J Lipman
Paper Details
References
  • References24
  • Citations2212
123
  • References24
  • Citations2212
12345...

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