Shewanella insulae sp. nov., isolated from a tidal flat

International Journal of Systematic and Evolutionary Microbiology
Sooyeon ParkJung-Hoon Yoon

Abstract

A Gram-stain-negative, aerobic, non-spore-forming, motile by single polar flagellum and ovoid or rod-shaped bacterial strain, designated JBTF-M18T, was isolated from tidal-flat sediment collected from the Yellow Sea, Republic of Korea. The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain JBTF-M18T fell within the clade comprising the type strains of Shewanella species. Strain JBTF-M18T exhibited 16S rRNA gene sequence similarity values of 97.1-98.8 % to the type strains of S. loihica, S. aquimarina, S. waksmanii and S. marisflavi and of less than 96.9 % to the type strains of the other Shewanella species. The average nucleotide identity and digital DNA-DNA hybridization values between strain JBTF-M18T and the type strains of S. waksmanii and S. loihica were 72.0 and 89.5% and 18.9 and 38.1 %, respectively. DNA-DNA relatedness values between strain JBTF-M18T and the type strains of S. aquimarina and S. marisflavi were 14 and 19 %, respectively. The DNA G+C content of strain JBTF-M18T from genomic sequence data was 52.9 %. Strain JBTF-M18Tcontained MK-6 as the predominant menaquinone and Q-7 and Q-8 as the predominant ubiquinones. It had iso-C15 : 0, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6...Continue Reading

References

Sep 12, 1998·International Journal of Systematic Bacteriology·K VenkateswaranK H Nealson
May 13, 1999·International Journal of Systematic Bacteriology·K VenkateswaranK H Nealson
Jan 5, 2002·International Journal of Systematic and Evolutionary Microbiology·A BrunsL Berthe-Corti
Aug 2, 2003·International Journal of Systematic and Evolutionary Microbiology·Jung-Hoon YoonYong-Ha Park
Sep 18, 2003·International Journal of Systematic and Evolutionary Microbiology·Elena P IvanovaValery V Mikhailov
Feb 1, 1957·Journal of Cellular Physiology·G COHEN-BAZIRER Y STANIER
Nov 17, 2004·International Journal of Systematic and Evolutionary Microbiology·Jung-Hoon YoonTae-Kwang Oh
Jan 18, 2005·International Journal of Systematic and Evolutionary Microbiology·Meiying XuGuoping Sun
Feb 11, 2005·Proceedings of the National Academy of Sciences of the United States of America·Konstantinos T Konstantinidis, James M Tiedje
Aug 12, 2006·International Journal of Systematic and Evolutionary Microbiology·Haichun GaoJizhong Zhou
Jan 16, 2007·International Journal of Systematic and Evolutionary Microbiology·Johan GorisJames M Tiedje
Oct 27, 2009·Proceedings of the National Academy of Sciences of the United States of America·Michael Richter, Ramon Rosselló-Móra
Apr 18, 2012·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Anton BankevichPavel A Pevzner
Feb 26, 2013·BMC Bioinformatics·Jan P Meier-KolthoffMarkus Göker
Jun 6, 2014·International Journal of Systematic and Evolutionary Microbiology·Sooyeon ParkJung-Hoon Yoon
Mar 11, 2016·International Journal of Systematic and Evolutionary Microbiology·Ji-Young KimDuck-Chul Oh
Feb 17, 2017·Antonie van Leeuwenhoek·Seok-Hwan YoonJongsik Chun
Jun 24, 2017·International Journal of Systematic and Evolutionary Microbiology·Imchang LeeJongsik Chun
Aug 19, 2017·International Journal of Systematic and Evolutionary Microbiology·Sooyeon ParkJung-Hoon Yoon
Jan 3, 2018·International Journal of Systematic and Evolutionary Microbiology·Jongsik ChunMartha E Trujillo
May 5, 2018·International Journal of Systematic and Evolutionary Microbiology·Aidan C Parte
Jul 22, 2018·International Journal of Systematic and Evolutionary Microbiology·Bo-Ram YunSeung Bum Kim

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.