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SIANN: Strain Identification by Alignment to Near Neighbors

bioRxiv

Jan 10, 2014

Samuel MinotDana R Kadavy

Abstract

Next-generation sequencing is increasingly being used to study samples composed of mixtures of organisms, such as in clinical applications where the presence of a pathogen at very low abundance may be highly important. We present an analytical method (SIANN: Strain Identification by Ali...read more

Mentioned in this Paper

Genome
Pathogenic Organism
Massively-Parallel Sequencing
Organism
Specialty Physician
Species
Sequestering of TGFbeta in Extracellular Matrix
Proximal
Neighbor
11
25
Paper Details
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SIANN: Strain Identification by Alignment to Near Neighbors

bioRxiv

Jan 10, 2014

Samuel MinotDana R Kadavy

PMID: 990001727

DOI: 10.1101/001727

Abstract

Next-generation sequencing is increasingly being used to study samples composed of mixtures of organisms, such as in clinical applications where the presence of a pathogen at very low abundance may be highly important. We present an analytical method (SIANN: Strain Identification by Ali...read more

Mentioned in this Paper

Genome
Pathogenic Organism
Massively-Parallel Sequencing
Organism
Specialty Physician
Species
Sequestering of TGFbeta in Extracellular Matrix
Proximal
Neighbor
11
25
Paper Details
References
  • References
  • Citations
  • finger pointing at paper

    References currently unavailable

    We're still populating references for this paper, please check back later.
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