Simulating squirmers with multiparticle collision dynamics

The European Physical Journal. E, Soft Matter
Andreas Zöttl, Holger Stark

Abstract

Multiparticle collision dynamics is a modern coarse-grained simulation technique to treat the hydrodynamics of Newtonian fluids by solving the Navier-Stokes equations. Naturally, it also includes thermal noise. Initially it has been applied extensively to spherical colloids or bead-spring polymers immersed in a fluid. Here, we review and discuss the use of multiparticle collision dynamics for studying the motion of spherical model microswimmers called squirmers moving in viscous fluids.

References

Nov 4, 1996·Physical Review Letters·H A Stone, A D Samuel
Apr 20, 2001·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·T Ihle, D M Kroll
Oct 9, 2002·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·E Allahyarov, G Gompper
Oct 4, 2003·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·E TüzelD M Kroll
Jul 13, 2004·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Ali Najafi, Ramin Golestanian
Oct 26, 2005·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·T Ihle, D M Kroll
Oct 26, 2005·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·T Ihle, D M Kroll
Jul 21, 2006·The Journal of Physical Chemistry. B·C M Pooley, J M Yeomans
Oct 10, 2006·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·J T Padding, A A Louis
Nov 3, 2006·The Journal of Experimental Biology·Takuji Ishikawa, Masateru Hota
Feb 7, 2007·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·E TüzelD M Kroll
May 16, 2007·Physical Review Letters·Gunnar Rückner, Raymond Kapral
Sep 15, 2007·Journal of Theoretical Biology·T IshikawaT Yamaguchi
Nov 13, 2007·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Ingo O GötzeGerhard Gompper
Mar 21, 2008·Physical Review Letters·Takuji Ishikawa, T J Pedley
May 2, 2008·The Journal of Chemical Physics·Yu-Guo Tao, Raymond Kapral
Sep 4, 2008·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Hiroshi Noguchi, Gerhard Gompper
Feb 21, 2009·Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry·Yu-Guo Tao, Raymond Kapral
Mar 5, 2009·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Yingzi YangGerhard Gompper
Jul 17, 2009·The Journal of Chemical Physics·Yu-Guo Tao, Raymond Kapral
Apr 7, 2010·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·A M Leshansky
Aug 18, 2010·Biophysical Journal·Jens ElgetiGerhard Gompper
Sep 24, 2010·The European Physical Journal. E, Soft Matter·R Matas Navarro, I Pagonabarraga
Sep 28, 2010·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Takuji IshikawaT J Pedley
Dec 8, 2010·The Journal of Chemical Physics·Snigdha Thakur, Raymond Kapral
Jan 15, 2011·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Yingzi YangGerhard Gompper
Jan 15, 2011·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Ingo O Götze, Gerhard Gompper
Jan 15, 2011·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Davide GiacchéTakami Yamaguchi
Mar 17, 2011·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Lailai ZhuLuca Brandt
Mar 25, 2011·Angewandte Chemie·Snigdha ThakurRaymond Kapral
Jul 20, 2011·The Journal of Chemical Physics·Snigdha Thakur, Raymond Kapral
May 20, 2009·Journal of Physics. Condensed Matter : an Institute of Physics Journal·Matthew T Downton, Holger Stark
Feb 7, 2012·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Mingcheng Yang, Marisol Ripoll
Feb 23, 2012·Proceedings of the National Academy of Sciences of the United States of America·Amin DoostmohammadiArezoo M Ardekani
Apr 3, 2012·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Snigdha Thakur, Raymond Kapral
Sep 26, 2012·Physical Review Letters·Andreas Zöttl, Holger Stark
Nov 28, 2012·The European Physical Journal. E, Soft Matter·Mu-Jie HuangAlexander S Mikhailov
Jan 17, 2013·The Journal of Chemical Physics·Raymond Kapral
Feb 5, 2013·Physical Review Letters·Tommaso BrottoDenis Bartolo
Mar 15, 2013·Proceedings of the National Academy of Sciences of the United States of America·Jens Elgeti, Gerhard Gompper
Jul 16, 2013·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·S Wang, A M Ardekani
Aug 27, 2013·PloS One·Shang Yik ReighGerhard Gompper
Feb 4, 2014·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Kenta Ishimoto, Eamonn A Gaffney
Mar 4, 2014·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Yingzi YangGerhard Gompper
Jul 12, 2014·Soft Matter·Mingcheng YangMarisol Ripoll
Aug 15, 2014·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Gao-Jin Li, Arezoo M Ardekani
Oct 15, 2014·Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics·Ricard Matas-NavarroSuzanne M Fielding

❮ Previous
Next ❯

Citations

Mar 6, 2019·Journal of Physics. Condensed Matter : an Institute of Physics Journal·Andreas Zöttl, Julia M Yeomans
Feb 15, 2020·Journal of Physics. Condensed Matter : an Institute of Physics Journal·Gerhard GompperSohan Kale
Jun 26, 2020·Soft Matter·Arne W Zantop, Holger Stark
Aug 26, 2018·The European Physical Journal. E, Soft Matter·Lorenzo RovigattiJohn Russo
Jan 25, 2020·The European Physical Journal. E, Soft Matter·Simone Napolitano
May 24, 2020·The European Physical Journal. E, Soft Matter·Felix Rühle, Holger Stark
Sep 14, 2020·The European Physical Journal. E, Soft Matter·Alexander R SprengerAbdallah Daddi-Moussa-Ider
Jan 16, 2021·The Journal of Chemical Physics·Arne W Zantop, Holger Stark
May 4, 2021·The European Physical Journal. E, Soft Matter·Shubhadeep Mandal, Marco G Mazza
Nov 18, 2021·Journal of Physics. Condensed Matter : an Institute of Physics Journal·Benno Liebchen, Aritra K Mukhopadhyay

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
Ingo O Götze, Gerhard Gompper
Proceedings of the National Academy of Sciences of the United States of America
W T Maccreadie
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
Pep Español, Mariano Revenga
© 2022 Meta ULC. All rights reserved