Sphingobacterium praediipecoris sp. nov. isolated from effluent of a dairy manure treatment plant

Archives of Microbiology
Ve Van LeJong-Chan Chae

Abstract

A novel Gram-reaction-negative, rod-shaped, non-motile bacterium, designated as strain G2-10T was isolated from effluent of a dairy manure treatment plant. Growth occurred at 20-40 °C (optimum at 25-30 °C), pH 7.0-8.0 (optimum at pH 7.0). The range of NaCl concentration for growth was between 0% and 3% (w/v) (optimum 0-1%, w/v). Comparison of 16S rRNA gene sequence indicated that strain G2-10T was moderately related to the type strains of Sphingobacterium nematocida M-SX103T and Sphingobacterium suaedae T47T with a pair-wise sequence similarity of 94.3% and 94.0%, respectively. The major fatty acid constituents of strain G2-10T were identified as iso-C15:0 (37.6%), summed feature 3 (consisting of C16:1ω7c and/or C16:1ω6c, 29.6%) and iso-C17:0 3-OH (15.2%). Phosphatidylethanolamine was the major polar lipids of strain G2-10T. Sphingophospholipids were present. The isoprenoid quinone was composed of only MK-7. The DNA G + C content of strain G2-10T was found to be 42.5 mol%. The phenotypic, chemotaxonomic and phylogenetic properties suggest that strain G2-10T represents a novel species within the genus Sphingobacterium, for which the name Sphingobacterium praediipecoris is proposed. The type strain is G2-10T (= KCTC 52880T = NBRC...Continue Reading

References

Apr 1, 1995·Anaerobe·M KatoK Ueno
Aug 25, 2009·International Journal of Systematic and Evolutionary Microbiology·B J TindallP Kämpfer
May 10, 2011·International Journal of Systematic and Evolutionary Microbiology·Jun ZhangShun-Peng Li
Oct 11, 2011·International Journal of Systematic and Evolutionary Microbiology·Jie LiuWen-Jun Li
May 9, 2012·International Journal of Systematic and Evolutionary Microbiology·Dong-Heon LeeHyung-Yeel Kahng
Oct 18, 2013·Molecular Biology and Evolution·Koichiro TamuraSudhir Kumar
Sep 17, 2015·International Journal of Systematic and Evolutionary Microbiology·Ji-Quan SunXiao-Lei Wu
Oct 27, 2015·International Journal of Systematic and Evolutionary Microbiology·Muhammad Zubair Siddiqi, Wan-Taek Im
Apr 22, 2016·International Journal of Systematic and Evolutionary Microbiology·Peter KämpferStefanie P Glaeser
Feb 1, 2017·International Journal of Systematic and Evolutionary Microbiology·Geert HuysM Albert
Jul 1, 1985·Evolution; International Journal of Organic Evolution·Joseph Felsenstein

❮ Previous
Next ❯

Citations

Mar 5, 2019·International Journal of Systematic and Evolutionary Microbiology·Aharon Oren, George M Garrity

❮ Previous
Next ❯

Methods Mentioned

BETA
PCR

Software Mentioned

MEGA6
MEGA
EzBioCloud

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

International Journal of Systematic and Evolutionary Microbiology
Jie LiuWen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
Hao FengYili Huang
International Journal of Systematic and Evolutionary Microbiology
Yongcui DengYuguang Zhou
International Journal of Systematic and Evolutionary Microbiology
Ruichen ZhengFang Peng
© 2022 Meta ULC. All rights reserved