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SplitMEM: Graphical pan-genome analysis with suffix skips

bioRxiv

Apr 6, 2014

Shoshana MarcusMichael C. Schatz

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Abstract

Motivation: With the rise of improved sequencing technologies, genomics is expanding from a single reference per species paradigm into a more comprehensive pan-genome approach with multiple individuals represented and analyzed together. One of the most sophisticated data structures for ...read more

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Species
Anatomic Node
Genome Sequencing
Single Nucleotide Polymorphism
Ozone
Population Group
Genome
Motivation
Matching Test
Structure
53
19
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  • SplitMEM: Graphical pan-genome analysis with suffix skips

    bioRxiv

    Apr 6, 2014

    Shoshana MarcusMichael C. Schatz

    PMID: 990003954

    DOI: 10.1101/003954

    Abstract

    Motivation: With the rise of improved sequencing technologies, genomics is expanding from a single reference per species paradigm into a more comprehensive pan-genome approach with multiple individuals represented and analyzed together. One of the most sophisticated data structures for ...read more

    Mentioned in this Paper

    Species
    Anatomic Node
    Genome Sequencing
    Single Nucleotide Polymorphism
    Ozone
    53
    19

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