Structure of genetic diversity in the two major gene pools of common bean (Phaseolus vulgaris L., Fabaceae).

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Myounghai Kwak, Paul Gepts

Abstract

Domesticated materials with well-known wild relatives provide an experimental system to reveal how human selection during cultivation affects genetic composition and adaptation to novel environments. In this paper, our goal was to elucidate how two geographically distinct domestication events modified the structure and level of genetic diversity in common bean. Specifically, we analyzed the genome-wide genetic composition at 26, mostly unlinked microsatellite loci in 349 accessions of wild and domesticated common bean from the Andean and Mesoamerican gene pools. Using a model-based approach, implemented in the software STRUCTURE, we identified nine wild or domesticated populations in common bean, including four of Andean and four of Mesoamerican origins. The ninth population was the putative wild ancestor of the species, which was classified as a Mesoamerican population. A neighbor-joining analysis and a principal coordinate analysis confirmed genetic relationships among accessions and populations observed with the STRUCTURE analysis. Geographic and genetic distances in wild populations were congruent with the exception of a few putative hybrids identified in this study, suggesting a predominant effect of isolation by distance....Continue Reading

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Citations

Sep 18, 2009·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Ming L WangJianming Yu
Apr 23, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Jérémy ClotaultDidier Peltier
May 27, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Marília Lobo BurlePaul Gepts
May 22, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·S A AngioiR Papa
Jul 8, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Melody McConnellPhillip McClean
Jul 26, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Andrés J CortésMatthew W Blair
Aug 9, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Ming Li WangJianming Yu
Aug 11, 2011·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·L NanniR Papa
Jul 10, 2012·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Andrés J CortésMatthew W Blair
Nov 6, 2012·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Matthew W BlairDoug R Cook
Jul 9, 2013·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Paula Rodrigues OblessucLuciana Lasry Benchimol-Reis
Mar 7, 2012·Proceedings of the National Academy of Sciences of the United States of America·Elena BitocchiRoberto Papa
Jul 23, 2011·Genome Génome / Conseil National De Recherches Canada·Silvia NicolèGianni Barcaccia
Nov 13, 2012·PloS One·Matthew W BlairAndrés J Cortés
Jun 4, 2011·Genetics and Molecular Biology·Juliana Morini Küpper Cardoso PerseguiniLuciana Benchimol Rubiano
Jun 9, 2014·Nature Genetics·Jeremy SchmutzScott A Jackson
Apr 8, 2014·Genome Génome / Conseil National De Recherches Canada·Augusto L DinizMaria Lucia Carneiro Vieira
Apr 23, 2014·Proceedings of the National Academy of Sciences of the United States of America·Pascale GerbaultMark G Thomas
Aug 29, 2014·Plant Molecular Biology·Bárbara Salomão de Faria MüllerRosana Pereira Vianello
Jan 17, 2016·FEMS Yeast Research·Isabelle Masneuf-PomaredeJean-Luc Legras
Nov 4, 2015·The New Phytologist·Monica RodriguezGiovanna Attene
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Apr 8, 2015·Molecular Genetics and Genomics : MGG·Andrea Ariani, Paul Gepts
Aug 11, 2015·Frontiers in Plant Science·Emiliano Villordo-PinedaJuan Caballero-Pérez
Jan 7, 2014·Plant Science : an International Journal of Experimental Plant Biology·Lorenzo RaggiValeria Negri
Jan 28, 2015·Archives of Virology·Surasak KhankhumSead Sabanadzovic
Jan 5, 2012·Genetics and Molecular Biology·Homar R Gill-LangaricaNetzahualcoyotl Mayek-Pérez
Mar 31, 2017·Genome Biology·Martha Rendón-AnayaAlfredo Herrera-Estrella
Oct 27, 2017·Molecular Biology and Evolution·Andrea ArianiPaul Gepts

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