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Supervised learning sets benchmark for robust spike rate inference from calcium imaging signals

bioRxiv

Oct 28, 2014

Lucas TheisMatthias Bethge

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Abstract

A fundamental challenge in calcium imaging has been to infer spike rates of neurons from the measured noisy calcium fluorescence traces. We systematically evaluate a range of spike inference algorithms on a large benchmark dataset (>100.000 spikes) recorded from varying neural tissue (V...read more

Mentioned in this Paper

All Nervous Tissue
Benign Neoplasm of Retina
Detection
Retinal Diseases
Malignant Neoplasm of Retina
Calcium [EPC]
Calcium Measurement
Calcium
Diagnostic Imaging
Neurons
8
126
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  • Supervised learning sets benchmark for robust spike rate inference from calcium imaging signals

    bioRxiv

    Oct 28, 2014

    Lucas TheisMatthias Bethge

    PMID: 990010777

    DOI: 10.1101/010777

    Abstract

    A fundamental challenge in calcium imaging has been to infer spike rates of neurons from the measured noisy calcium fluorescence traces. We systematically evaluate a range of spike inference algorithms on a large benchmark dataset (>100.000 spikes) recorded from varying neural tissue (V...read more

    Mentioned in this Paper

    All Nervous Tissue
    Benign Neoplasm of Retina
    Detection
    Retinal Diseases
    Malignant Neoplasm of Retina
    8
    126

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