Supporting data for the MS identification of distinct transferrin glycopeptide glycoforms and citrullinated peptides associated with inflammation or autoimmunity

Data in Brief
Antonio Rosal-VelaJaime Sancho

Abstract

This data article presents the results of all the statistical analyses applied to the relative intensities of the detected 2D-DiGE protein spots for each of the 3 performed DiGE experiments. The data reveals specific subsets of protein spots with significant differences between WT and CD38-deficient mice with either Collagen-induced arthritis (CIA), or with chronic inflammation induced by CFA, or under steady-state conditions. This article also shows the MS data analyses that allowed the identification of the protein species which serve to discriminate the different experimental groups used in this study. Moreover, the article presents MS data on the citrullinated peptides linked to specific protein species that were generated in CIA(+) or CFA-treated mice. Lastly, this data article provides MS data on the efficiency of the analyses of the transferrin (Tf) glycopeptide glycosylation pattern in spleen and serum from CIA(+) mice and normal controls. The data supplied in this work is related to the research article entitled "identification of multiple transferrin species in spleen and serum from mice with collagen-induced arthritis which may reflect changes in transferrin glycosylation associated with disease activity: the role of...Continue Reading

References

Oct 28, 2003·BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology·Erik R VossenaarGer J M Pruijn
Jul 15, 2011·Rapid Communications in Mass Spectrometry : RCM·Estela GiménezVictoria Sanz-Nebot
Apr 15, 2014·Nature Biotechnology·Juan A VizcaínoHenning Hermjakob

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Datasets Mentioned

BETA
PXD003163

Methods Mentioned

BETA
electrophoresis
glycosylation
deamination

Software Mentioned

ProteinScape
MassHunter
DeCyder
Excel
MassHunter Qualitative
Expasy
MASCOT
ProtParam
PeptideMass
Mascot Server

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