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SVM-dependent pairwise HMM: an application to protein pairwise alignments

Bioinformatics

Dec 15, 2017

Gabriele OrlandoWim F Vranken

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Abstract

Methods able to provide reliable protein alignments are crucial for many bioinformatics applications. In the last years many different algorithms have been developed and various kinds of information, from sequence conservation to secondary structure, have been used to improve the alignm...read more

Mentioned in this Paper

Sequence Analysis, Protein
Markov Chains
Support Vector Machines
Bio-Informatics
Protein Conformation, beta-Strand
Structure
Determination, Sequence Homology
Gene Products, Protein
Computer Programs and Programming
Altretamine
2
14
Paper Details
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SVM-dependent pairwise HMM: an application to protein pairwise alignments

Bioinformatics

Dec 15, 2017

Gabriele OrlandoWim F Vranken

PMID: 28666322

DOI: 10.1093/bioinformatics/btx391

Abstract

Methods able to provide reliable protein alignments are crucial for many bioinformatics applications. In the last years many different algorithms have been developed and various kinds of information, from sequence conservation to secondary structure, have been used to improve the alignm...read more

Mentioned in this Paper

Sequence Analysis, Protein
Markov Chains
Support Vector Machines
Bio-Informatics
Protein Conformation, beta-Strand
2
14
Paper Details
References
  • References31
  • Citations
  • No citations available

    This paper may not have been cited yet.

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