Synthetic peptide arrays for investigating protein interaction domains

FEBS Letters
Rudolf VolkmerChristiane Landgraf

Abstract

Synthetic peptide array technology was first developed in the early 1990s by Ronald Frank. Since then the technique has become a powerful tool for high throughput approaches in biology and biochemistry. Here, we focus on peptide arrays applied to investigate the binding specificity of protein interaction domains such as WW, SH3, and PDZ domains. We describe array-based methods used to reveal domain networks in yeast, and briefly review rules as well as ideas about the synthesis and application of peptide arrays. We also provide initial results of a study designed to investigate the nature and evolution of SH3 domain interaction networks in eukaryotes.

References

Jul 1, 1984·Proceedings of the National Academy of Sciences of the United States of America·H M GeysenS J Barteling
Jan 20, 1995·Science·T Clackson, J A Wells
Jan 9, 1996·Proceedings of the National Academy of Sciences of the United States of America·S Jones, J M Thornton
Mar 29, 1996·Journal of Molecular Biology·O LichtargeF E Cohen
Aug 1, 1997·Trends in Biochemical Sciences·P BorkC P Ponting
Aug 1, 1997·Computer Applications in the Biosciences : CABIOS·D B Searls
Jul 7, 1998·Journal of Molecular Biology·A A Bogan, K S Thorn
Sep 19, 1998·Proteins·L Holm, C Sander
Oct 26, 1999·The Journal of Peptide Research : Official Journal of the American Peptide Society·A KramerJ Schneider-Mergener
Jan 29, 2000·Journal of Immunological Methods·L OtvosH C Ertl
Jun 1, 2000·Advances in Protein Chemistry·S Das, T F Smith
Apr 3, 2001·Proceedings of the National Academy of Sciences of the United States of America·T ItoY Sakaki
Sep 27, 2002·Current Opinion in Biotechnology·Ulf ReimerJens Schneider-Mergener
Nov 15, 2002·Nature·David B Searls
Feb 22, 2003·Journal of Molecular Biology·José R PiresRalf Erdmann
Mar 14, 2003·Nature·Eric PhizickyStanley Fields
May 6, 2003·Proceedings of the National Academy of Sciences of the United States of America·Buyong MaRuth Nussinov
Jan 23, 2004·PLoS Biology·Christiane LandgrafGianni Cesareni
Mar 5, 2004·Proteomics·Hai HuJuan J Herrero
Mar 30, 2004·Proteomics·Soon-Hyung YookAlbert-László Barabási
May 11, 2004·Molecular Biology of the Cell·Hanspeter RottensteinerRalf Erdmann
Sep 24, 2004·Molecular Diversity·Thomas Kamradt, Rudolf Volkmer-Engert
Jun 14, 2005·Analytical Biochemistry·Armin A WeiserRudolf Volkmer-Engert
Sep 24, 2005·Organic Letters·Qi LinHelen E Blackwell
Sep 27, 2005·Drug Discovery Today·Elena SantonicoGianni Cesareni
Jan 28, 2006·Journal of Biochemical and Biophysical Methods·A DürauerA Jungbauer
Feb 24, 2006·Nature Reviews. Molecular Cell Biology·Mario Gimona
Apr 1, 2006·Chembiochem : a European Journal of Chemical Biology·Jana PrzezdziakRudolf Volkmer-Engert
Nov 1, 2006·Protein and Peptide Letters·Berit HoffmannRudolf Volkmer

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Citations

Feb 6, 2013·Molecular Imaging and Biology : MIB : the Official Publication of the Academy of Molecular Imaging·Annabell MarrVasileios Askoxylakis
Aug 21, 2013·Molecules : a Journal of Synthetic Chemistry and Natural Product Chemistry·Denis PrimMarc E Pfeifer
Aug 25, 2015·Cell Communication and Signaling : CCS·Cecilia Blikstad, Ylva Ivarsson
May 12, 2015·Journal of Molecular Recognition : JMR·Thierry VernetDanièle Altschuh
Oct 22, 2013·Current Opinion in Structural Biology·Nir LondonOra Schueler-Furman
Apr 17, 2014·Chemical Reviews·Lech-Gustav MilroyChristian Ottmann
May 12, 2018·Chemical Society Reviews·A LampelT Tuttle
Jul 17, 2018·Current Medicinal Chemistry·Annamaria SandomenicoMenotti Ruvo
Apr 30, 2020·Molecular & Cellular Proteomics : MCP·Katrina Meyer, Matthias Selbach
Jan 1, 2015·Microarrays·Sarah Picaud, Panagis Filippakopoulos
Apr 3, 2019·High-throughput·Andrea PalermoAlexander Nesterov-Mueller
Jan 17, 2021·Molecular & Cellular Proteomics : MCP·Katrina Meyer, Matthias Selbach
May 18, 2021·Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology·Valentina Lukinović, Kyle K Biggar
Jul 12, 2017·Journal of the American Chemical Society·Patrick T O'Kane, Milan Mrksich
Aug 16, 2021·Molecular & Cellular Proteomics : MCP·Evelyn RambergerPhilipp Mertins

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