Ten simple rules for dynamic causal modeling.

NeuroImage
K E StephanK J Friston

Abstract

Dynamic causal modeling (DCM) is a generic Bayesian framework for inferring hidden neuronal states from measurements of brain activity. It provides posterior estimates of neurobiologically interpretable quantities such as the effective strength of synaptic connections among neuronal populations and their context-dependent modulation. DCM is increasingly used in the analysis of a wide range of neuroimaging and electrophysiological data. Given the relative complexity of DCM, compared to conventional analysis techniques, a good knowledge of its theoretical foundations is needed to avoid pitfalls in its application and interpretation of results. By providing good practice recommendations for DCM, in the form of ten simple rules, we hope that this article serves as a helpful tutorial for the growing community of DCM users.

References

Oct 1, 1989·Proceedings of the National Academy of Sciences of the United States of America·D A McCormick, A Williamson
Jun 17, 1998·Proceedings of the National Academy of Sciences of the United States of America·S M Sherman, R W Guillery
May 14, 1999·Trends in Cognitive Sciences·B HorwitzA R McIntosh
Jun 9, 2000·Annual Review of Neuroscience·W Schultz, A Dickinson
Jan 13, 2001·Neural Networks : the Official Journal of the International Neural Network Society·A R McIntosh
Nov 5, 2002·Trends in Cognitive Sciences·Mark A. Pitt, In Jae Myung
Dec 7, 2002·The Neuroscientist : a Review Journal Bringing Neurobiology, Neurology and Psychiatry·Victoria Coutinho, Thomas Knöpfel
Mar 29, 2003·Neural Networks : the Official Journal of the International Neural Network Society·W D. Penny, S J. Roberts
Sep 2, 2003·NeuroImage·K J FristonW Penny
Oct 22, 2003·NeuroImage·Jane Neumann, Gabriele Lohmann
Nov 25, 2003·Journal of Cognitive Neuroscience·Andrea MechelliKarl J Friston
Jun 29, 2004·NeuroImage·W D PennyK J Friston
Oct 7, 2004·Current Opinion in Neurobiology·Klaas E StephanKarl J Friston
Dec 22, 2004·Journal of Anatomy·Klaas Enno Stephan
Jun 3, 2005·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Tali BitanM-Marsel Mesulam
Jun 7, 2005·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·Karl Friston
Sep 30, 2005·Proceedings of the National Academy of Sciences of the United States of America·John-Dylan HaynesGeraint Rees
Nov 2, 2005·PLoS Computational Biology·Philip E Bourne
Dec 31, 2005·Molecular Neurobiology·John Q WangLimin Mao
Jan 3, 2006·NeuroImage·Lucy LeeBarry Horwitz
Feb 14, 2006·NeuroImage·Olivier DavidKarl J Friston
Apr 26, 2006·NeuroImage·K J FristonR N Henson
Aug 11, 2006·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Alan N HamptonJohn P O'Doherty
Aug 25, 2006·Human Brain Mapping·Andrea B Protzner, Anthony R McIntosh
Oct 24, 2006·NeuroImage·Karl FristonWill Penny
Nov 25, 2006·Science·Christopher SummerfieldJoy Hirsch
Dec 13, 2006·NeuroImage·Stefan J KiebelKarl J Friston
Dec 28, 2006·Cerebral Cortex·Scott L Fairhall, Alumit Ishai
Feb 9, 2007·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Sreepadma P SontyDarren R Gitelman
Mar 30, 2007·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Klaas E StephanGereon R Fink
Apr 12, 2007·Journal of Biosciences·Klaas E StephanKarl J Friston
May 5, 2007·NeuroImage·Marta I GarridoKarl J Friston
Jun 5, 2007·PLoS Computational Biology·Sukhbinder KumarTimothy D Griffiths
Jul 10, 2007·Cerebral Cortex·Uta NoppeneyKarl J Friston
Jul 17, 2007·NeuroImage·R J MoranK J Friston
Sep 22, 2007·NeuroImage·Klaas Enno StephanKarl J Friston
Oct 16, 2007·NeuroImage·A C MarreirosK J Friston
Oct 24, 2007·NeuroImage·Stefan J KiebelKarl J Friston
Nov 6, 2007·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Meike J GrolIvan Toni
Nov 13, 2007·NeuroImage·Karl FristonJérémie Mattout
Jan 15, 2008·NeuroImage·Russell A PoldrackThomas E Nichols
Mar 4, 2008·NeuroImage·Gerard R RidgwayNick C Fox

❮ Previous
Next ❯

Citations

Jan 24, 2013·Nature Communications·Takamitsu WatanabeNaoki Masuda
Sep 26, 2013·Proceedings of the National Academy of Sciences of the United States of America·Gesa HartwigsenHartwig R Siebner
May 9, 2012·Brain Connectivity·Nia GouldenShane McKie
Jun 20, 2012·Brain Connectivity·Spiro P PantazatosJoy Hirsch
Jul 25, 2012·Brain Connectivity·Jan Carl BeuckeNorbert Kathmann
Feb 22, 2012·Brain : a Journal of Neurology·Estelle RaffinPascal Giraux
Sep 3, 2010·Cerebral Cortex·Peter J GianarosAhmad R Hariri
Aug 10, 2012·Cerebral Cortex·André SchmidtFranz X Vollenweider
Dec 20, 2012·Journal of Cognitive Neuroscience·Gesa HartwigsenHartwig R Siebner
Jul 7, 2011·PLoS Computational Biology·Kay H BrodersenKlaas E Stephan
Aug 20, 2011·PLoS Computational Biology·Rosalyn J MoranPeter Brown
Feb 26, 2013·PLoS Computational Biology·Falk LiederKlaas E Stephan
Jul 15, 2011·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Ian C BallardR Alison Adcock
Oct 14, 2011·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Maria G VeldhuizenDana M Small
Feb 9, 2013·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Oiwi Parker JonesCathy J Price
Mar 24, 2012·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Thomas M SchofieldAlexander P Leff
Apr 15, 2011·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Michael P EwbankAndrew J Calder
May 4, 2012·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Albert R PowersMark T Wallace
Jun 3, 2011·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Fiona M RichardsonCathy J Price
Feb 6, 2013·Cerebral Cortex·Keith J Kawabata DuncanJoseph T Devlin
Jul 19, 2012·Annual Review of Psychology·Anthony R McIntosh, Bratislav Mišić
Mar 20, 2014·Psychopharmacology·André SchmidtStefan Borgwardt
Mar 12, 2013·Cerebral Cortex·Sebastian GluthChristian Büchel
Feb 25, 2014·Clinical Neurophysiology : Official Journal of the International Federation of Clinical Neurophysiology·Gerald CoorayTom Brismar
Aug 8, 2014·Journal of Cognitive Neuroscience·Roland G BenoitMichael C Anderson
Dec 7, 2013·The Journal of Neuroscience : the Official Journal of the Society for Neuroscience·Jennifer M WalzPaul Sajda
Mar 1, 2012·Chemosensory Perception·Maria G VeldhuizenDana M Small
Dec 15, 2015·NeuroImage·Adam HampshireJames Rowe

❮ Previous
Next ❯

Software Mentioned

DCM
SPM
Statistical Parametric Mapping ( SPM )

Related Concepts

Related Feeds

Brain Lower Grade Glioma

Low grade gliomas in the brain form from oligodendrocytes and astrocytes and are the slowest-growing glioma in adults. Discover the latest research on these brain tumors here.

Cardiac Conduction System

The cardiac conduction system is a specialized tract of myocardial cells responsible for maintaining normal cardiac rhythm. Discover the latest research on the cardiac conduction system here.