Text mining biomedical literature for constructing gene regulatory networks

Interdisciplinary Sciences, Computational Life Sciences
Yong-Ling Song, Su-Shing Chen

Abstract

In this paper, we present the framework of a Gene Regulatory Networks System: GRNS. The goals of GRNS include automatically mining biomedical literature to extract gene regulatory information (strain number, genotype, gene regulatory relation, and phenotype), automatically constructing gene regulatory networks based on extracted information and integrating biomedical knowledge into the regulatory networks.

References

Apr 13, 2001·Bioinformatics·E M MarcotteD Eisenberg
Aug 3, 2002·Nature Reviews. Genetics·Mark D Yandell, William H Majoros
Dec 20, 2002·Bioinformatics·Lynette HirschmanCathy H Wu
Jan 10, 2003·Nucleic Acids Research·Brigitte BoeckmannMichel Schneider
May 23, 2003·Bioinformatics·Goran NenadicSophia Ananiadou
Feb 26, 2004·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Hagit Shatkay, Ronen Feldman
Mar 24, 2004·Current Opinion in Microbiology·Andrew L Goodman, Stephen Lory
Jul 17, 2004·Bioinformatics·Daniel M McDonaldByron B Marshall
Sep 24, 2004·Trends in Microbiology·Donald E Woods
Apr 7, 2005·Artificial Intelligence in Medicine·Stergos AfantenosPanagiotis Stamatopoulos
Apr 14, 2005·Briefings in Bioinformatics·Aaron M Cohen, William R Hersh
Jul 28, 2005·Bioinformatics·Jasmin SaricPeer Bork
Apr 29, 2006·Bioinformatics·X YuanC H Wu

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Citations

Oct 7, 2011·BMC Bioinformatics·Anabel UsiéFrancesc Solsona
Mar 29, 2016·PeerJ·Preecha PatumcharoenpolWanwipa Vongsangnak
May 28, 2016·BMC Bioinformatics·Yupeng Li, Scott A Jackson
Sep 29, 2015·IEEE/ACM Transactions on Computational Biology and Bioinformatics·Rami Al-DalkyMurad Qasaimeh

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