PMID: 8464696Mar 11, 1993Paper

The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates

Nucleic Acids Research
U LagercrantzL Andersson

Abstract

The abundance of different simple sequence motifs in plants was accessed through data base searches of DNA sequences and quantitative hybridization with synthetic dinucleotide repeats. Database searches indicated that microsatellites are five times less abundant in the genomes of plants than in mammals. The most common plant repeat motif was AA/TT followed by AT/TA and CT/GA. This group comprised about 75% of all microsatellites with a length of more than 6 repeats. The GT/CA motif being the most abundant dinucleotide repeat in mammals was found to be considerably less frequent in plants. To address the question if plant simple repeat sequences are variable as in mammals, (GT)n and (CT)n microsatellites were isolated from B.napus. Five loci were investigated by PCR-analysis and amplified products were obtained for all microsatellites from B. oleracea, B.napus and B.rapa DNA, but only for one primer pair from B.nigra. Polymorphism was detected for all microsatellites.

References

Apr 1, 1992·Genomics·J S Beckman, J L Weber
Feb 1, 1991·Genome Génome / Conseil National De Recherches Canada·R Condit, S P Hubbell
Nov 25, 1990·Nucleic Acids Research·J G WilliamsS V Tingey
Apr 1, 1990·Proceedings of the National Academy of Sciences of the United States of America·E P EconomouS E Antonarakis
Aug 27, 1981·Nature·Y GruenbaumA Razin
May 25, 1984·Nucleic Acids Research·D Tautz, M Renz
Nov 1, 1982·Proceedings of the National Academy of Sciences of the United States of America·H HamadaT Kakunaga

❮ Previous
Next ❯

Citations

Aug 1, 1997·Electrophoresis·U H RefsethK S Jakobsen
Jan 1, 1994·Plant Molecular Biology·D Brunel
Feb 1, 1995·Plant Molecular Biology·J Becker, M Heun
Feb 6, 1995·Molecular & General Genetics : MGG·M S RöderM W Ganal
Jan 1, 1993·Mammalian Genome : Official Journal of the International Mammalian Genome Society·H Ellegren
Jul 1, 1995·World Journal of Microbiology & Biotechnology·P Winter, G Kahl
Sep 1, 1996·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·A K Szewc-McFaddenJ R McFerson
Sep 1, 1996·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·S A Cato, T E Richardson
Jan 15, 1996·Molecular & General Genetics : MGG·P Broun, S D Tanksley
May 18, 2004·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·N NicotP Sourdille
Apr 5, 2005·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·M V GutierrezA M Torres
Jun 9, 2005·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·S FeingoldJ Lorenzen
Jun 23, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Mariko HirataMasahiro Fujimori
Jun 23, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Jian-Bin YuTomohiro Ban
Aug 26, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·M J HaydenP J Sharp
Nov 15, 2006·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Mathews M DidaKatrien M Devos
Jul 20, 2007·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·P R HearndenK J Chalmers
Apr 2, 2008·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·L GongT Lelley
Feb 5, 2009·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Xiaomao ChengKede Liu
Mar 13, 2012·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Pu YangKede Liu
Jan 1, 1997·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·H AkagiT Fujimura
Aug 3, 2005·Mammalian Genome : Official Journal of the International Mammalian Genome Society·Céline Chantry-DarmonClaire Rogel-Gaillard
Sep 18, 2007·Chromosome Research : an International Journal on the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology·Angeles Cuadrado, Nicolas Jouve
May 18, 2000·Plant Science : an International Journal of Experimental Plant Biology·G M CordeiroR J Henry
Aug 15, 2000·Plant Science : an International Journal of Experimental Plant Biology·E CasacubertaA Monfort
Aug 10, 2000·Trends in Ecology & Evolution·G Nève, E Meglécz
Apr 17, 1999·The Plant Journal : for Cell and Molecular Biology·L RamsayR Waugh
Aug 6, 1996·Proceedings of the National Academy of Sciences of the United States of America·T Schmidt, J S Heslop-Harrison
Jul 20, 2011·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Nirala RamchiaryYong Pyo Lim
Dec 16, 2004·The Journal of Heredity·M PérezP Presa
Apr 17, 2010·Molecular Biology and Evolution·Ming ChenJun Peng
Oct 11, 1995·Nucleic Acids Research·D B Goldstein, A G Clark
Nov 1, 1996·Nucleic Acids Research·F QuigleyR Mache
Jul 26, 2002·Molecular Biology and Evolution·Yves VigourouxJohn Doebley

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Z WangS D Tanksley
The Plant Journal : for Cell and Molecular Biology
Michele Morgante, A M Olivieri
Genome Génome / Conseil National De Recherches Canada
R Condit, S P Hubbell
© 2021 Meta ULC. All rights reserved