The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions

Protein Science : a Publication of the Protein Society
Rose OughtredMike Tyers

Abstract

The BioGRID (Biological General Repository for Interaction Datasets, thebiogrid.org) is an open-access database resource that houses manually curated protein and genetic interactions from multiple species including yeast, worm, fly, mouse, and human. The ~1.93 million curated interactions in BioGRID can be used to build complex networks to facilitate biomedical discoveries, particularly as related to human health and disease. All BioGRID content is curated from primary experimental evidence in the biomedical literature, and includes both focused low-throughput studies and large high-throughput datasets. BioGRID also captures protein post-translational modifications and protein or gene interactions with bioactive small molecules including many known drugs. A built-in network visualization tool combines all annotations and allows users to generate network graphs of protein, genetic and chemical interactions. In addition to general curation across species, BioGRID undertakes themed curation projects in specific aspects of cellular regulation, for example the ubiquitin-proteasome system, as well as specific disease areas, such as for the SARS-CoV-2 virus that causes COVID-19 severe acute respiratory syndrome. A recent extension of ...Continue Reading

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May 1, 2021·International Journal of Molecular Sciences·Isabell Bludau
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Jun 24, 2021·NAR Genomics and Bioinformatics·Pengyu Ni, Zhengchang Su

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Methods Mentioned

BETA
ubiquitination

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