PMID: 3754962May 12, 1986Paper

The complete nucleotide sequence of RNA beta from the type strain of barley stripe mosaic virus

Nucleic Acids Research
G D Gustafson, S L Armour

Abstract

The complete nucleotide sequence of RNA beta from the type strain of barley stripe mosaic virus (BSMV) has been determined. The sequence is 3289 nucleotides in length and contains four open reading frames (ORFs) which code for proteins of Mr 22,147 (ORF1), Mr 58,098 (ORF2), Mr 17,378 (ORF3), and Mr 14,119 (ORF4). The predicted N-terminal amino acid sequence of the polypeptide encoded by the ORF nearest the 5'-end of the RNA (ORF1) is identical (after the initiator methionine) to the published N-terminal amino acid sequence of BSMV coat protein for 29 of the first 30 amino acids. ORF2 occupies the central portion of the coding region of RNA beta and ORF3 is located at the 3'-end. The ORF4 sequence overlaps the 3'-region of ORF2 and the 5'-region of ORF3 and differs in codon usage from the other three RNA beta ORFs. The coding region of RNA beta is followed by a poly(A) tract and a 238 nucleotide tRNA-like structure which are common to all three BSMV genomic RNAs.

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Citations

Oct 1, 1996·Plant Molecular Biology·I G MaiaF Bernardi
Jul 1, 1989·Journal of Molecular Evolution· Morozov SYuJ G Atabekov
Nov 1, 1990·Proceedings of the National Academy of Sciences of the United States of America·I T PettyA O Jackson
Jan 11, 1988·Nucleic Acids Research·R L ForsterR C Gardner
Nov 11, 1989·Nucleic Acids Research·A E Gorbalenya, E V Koonin
Nov 6, 2007·Molecular Plant-microbe Interactions : MPMI·Marianne Bruun-RasmussenMerete Albrechtsen
Apr 30, 2009·Annual Review of Phytopathology·Andrew O JacksonMi Yeon Lee
Jan 1, 1993·Critical Reviews in Biochemistry and Molecular Biology·E V Koonin, V V Dolja
Dec 1, 1990·Virology·I T Petty, A O Jackson
Aug 29, 2012·Biochemical and Biophysical Research Communications·Xianchao Sun, Chaozheng Zhang
May 5, 1988·Nature·T C Hodgman
Sep 7, 2018·Scientific Reports·Yeonhwa JoWon Kyong Cho

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