The data universe of structural biology

IUCrJ
Helen M BermanCatherine L Lawson

Abstract

The Protein Data Bank (PDB) has grown from a small data resource for crystallographers to a worldwide resource serving structural biology. The history of the growth of the PDB and the role that the community has played in developing standards and policies are described. This article also illustrates how other biophysics communities are collaborating with the worldwide PDB to create a network of interoperating data resources. This network will expand the capabilities of structural biology and enable the determination and archiving of increasingly complex structures.

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Citations

Feb 8, 2021·Protein Science : a Publication of the Protein Society·Zhen-Lu Li, Matthias Buck
May 1, 2021·International Journal of Molecular Sciences·Talia B KimberAndrea Volkamer
May 7, 2021·The Journal of Biological Chemistry·Karolina Michalska, Andrzej Joachimiak
Aug 28, 2021·Antibodies·Ramachandran MuraliMark Greene

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Methods Mentioned

BETA
protein folding
X-ray
nuclear magnetic resonance
electron microscopy
NMR
electron crystallography
atomic
electron paramagnetic resonance
FRET

Software Mentioned

EMDB
EMPIAR
mmCIF
NMR Exchange Format ( NEF
SAS

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