Apr 11, 2020

The development of a novel diagnostic PCR for Madurella mycetomatis using a comparative genome approach

BioRxiv : the Preprint Server for Biology
Wilson LimW W J van de Sande


Eumycetoma is a neglected tropical disease characterized by large tumorous lesions. It is most commonly caused by the fungus Madurella mycetomatis which accounts for more than 70% of cases in central Africa. Currently, identification of the causative agent can only be reliably performed by a species-specific PCR. However, we recently demonstrated that our M. mycetomatis specific PCR can cross-react with Madurella pseudomycetomatis. We therefore used a comparative genome approach to develop a new M. mycetomatis specific PCR for species identification. For this we compared the published M. mycetomatis genome to genomes of other organisms in BLASTCLUST to identify unique M. mycetomatis predicted protein coding sequences. Based on 16 of these unique sequences, PCR primers were developed. The specificity of these primers was further evaluated in other eumycetoma causing agents including the Madurella sibling species. Out of the 16 tested sequences, only one was unique for M. mycetomatis and this should be used as a novel diagnostic marker for M. mycetomatis.

  • References
  • Citations


  • We're still populating references for this paper, please check back later.
  • References
  • Citations


  • This paper may not have been cited yet.

Mentioned in this Paper

Computer Software
Leukocyte Migration Agarose Test
Basic Local Alignment Search Tool
Genome Assembly Sequence
Genetic Vectors
DRAM1 gene

Related Feeds

BioRxiv & MedRxiv Preprints

BioRxiv and MedRxiv are the preprint servers for biology and health sciences respectively, operated by Cold Spring Harbor Laboratory. Here are the latest preprint articles (which are not peer-reviewed) from BioRxiv and MedRxiv.

Related Papers

Transactions of the Royal Society of Tropical Medicine and Hygiene
Hana S ELbadawiA Fahal
Antimicrobial Agents and Chemotherapy
W W J van de SandeAlex van Belkum
© 2020 Meta ULC. All rights reserved