PMID: 11073452Nov 10, 2000

The evolutionary fate and consequences of duplicate genes

Science
Michael Lynch, J S Conery

Abstract

Gene duplication has generally been viewed as a necessary source of material for the origin of evolutionary novelties, but it is unclear how often gene duplicates arise and how frequently they evolve new functions. Observations from the genomic databases for several eukaryotic species suggest that duplicate genes arise at a very high rate, on average 0.01 per gene per million years. Most duplicated genes experience a brief period of relaxed selection early in their history, with a moderate fraction of them evolving in an effectively neutral manner during this period. However, the vast majority of gene duplicates are silenced within a few million years, with the few survivors subsequently experiencing strong purifying selection. Although duplicate genes may only rarely evolve new functions, the stochastic silencing of such genes may play a significant role in the passive origin of new species.

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Jul 27, 2002·Annual Review of Genomics and Human Genetics·Ken Inoue, James R Lupski
Mar 28, 2007·Annual Review of Genomics and Human Genetics·Bernard Conrad, Stylianos E Antonarakis
May 10, 2005·Annual Review of Microbiology·Gianni Liti, Edward J Louis
Sep 7, 2012·Comparative and Functional Genomics·Chien-Hua PengChuan-Yi Tang
Aug 25, 2012·International Journal of Evolutionary Biology·Olivia Mendivil Ramos, David E K Ferrier
Mar 9, 2005·Cytogenetic and Genome Research·X-F Ma, J P Gustafson
Jun 30, 2010·Genetics, Selection, Evolution : GSE·Zhen WangYixue Li
Jun 26, 2009·BMC Bioinformatics·Zhe LiJingchu Luo
Nov 3, 2011·BMC Bioinformatics·Liang LiuZhanji Liu
Dec 22, 2011·BMC Bioinformatics·Anasua SarkarMacha Nikolski
Dec 22, 2011·BMC Bioinformatics·Olivier Tremblay SavardNadia El-Mabrouk
May 10, 2012·BMC Bioinformatics·Eric AudemardThomas Faraut
Jul 13, 2012·BMC Bioinformatics·Zhan ZhouYufeng Wang
Jan 11, 2013·BMC Bioinformatics·Olivier Tremblay-Savard, Krister M Swenson
Mar 10, 2004·BMC Bioinformatics·Estienne C SwartCathal Seoighe
May 5, 2010·BMC Evolutionary Biology·Hong-Zheng Sun, Song Ge
Jan 27, 2010·BMC Evolutionary Biology·Paulina SchmittJulien de Lorgeril
Oct 19, 2010·BMC Evolutionary Biology·Francisco M CodoñerMario A Fares
Oct 23, 2010·BMC Evolutionary Biology·Vladimir M MilenkovicOlaf Strauss
Feb 19, 2010·BMC Evolutionary Biology·Jun SunJianfan Wen
Feb 23, 2010·BMC Evolutionary Biology·Tomasz ZemojtelFried J T Zwartkruis
Mar 20, 2010·BMC Evolutionary Biology·Shu-Ye JiangSrinivasan Ramachandran
May 27, 2011·BMC Evolutionary Biology·Chrysanthi AinaliJohn M Hancock
Sep 16, 2011·BMC Evolutionary Biology·Rebecca P DuncanAlex C C Wilson
Sep 29, 2011·BMC Evolutionary Biology·Francisco J FernandezM Cristina Vega
Feb 22, 2011·BMC Evolutionary Biology·Mark T A DonoghueCharles Spillane
Aug 7, 2012·BMC Evolutionary Biology·Zhengyuan WangMakedonka Mitreva
Jan 1, 2013·BMC Evolutionary Biology·Arvind Y M SundaramJorge M O Fernandes
Nov 19, 2013·BMC Evolutionary Biology·Claire C MorganMary J O'Connell
Jul 9, 2004·BMC Evolutionary Biology·I King JordanEugene V Koonin
Dec 14, 2006·BMC Evolutionary Biology·Sònia CasillasAlfredo Ruiz
Jun 24, 2006·BMC Evolutionary Biology·Igor V MerkeevAndrey A Mironov
Aug 31, 2006·BMC Evolutionary Biology·James A Cotton, Roderic D M Page
Aug 1, 2007·BMC Evolutionary Biology·Hiromi KochiwaAkio Kanai
Feb 17, 2007·BMC Evolutionary Biology·Edna C Suárez-Castillo, José E García-Arrarás
Feb 27, 2007·BMC Evolutionary Biology·Andrew P Jackson
Feb 10, 2007·BMC Evolutionary Biology·Iñaki ComasFernando González-Candelas
Jun 27, 2008·BMC Evolutionary Biology·Tomas A LarssonDan Larhammar
Aug 14, 2008·BMC Evolutionary Biology·Nikolaos GeorgelisL Curtis Hannah
Sep 23, 2008·BMC Evolutionary Biology·Görel SundströmDan Larhammar
Oct 4, 2008·BMC Evolutionary Biology·Claudia MünchWerner Schempp
Oct 14, 2008·BMC Evolutionary Biology·David ArmisénSébastien Aubourg
Dec 18, 2008·BMC Evolutionary Biology·Adi Kozminsky-AtiasNoam Zilberberg
Feb 12, 2008·BMC Evolutionary Biology·Frédéric J J ChainBen J Evans
Feb 14, 2008·BMC Evolutionary Biology·Christina M LaukaitisRobert C Karn
May 16, 2009·BMC Evolutionary Biology·Paweł Mackiewicz, Elzbieta Wyroba
Aug 5, 2009·BMC Evolutionary Biology·Xue-Cheng ZhangGary Stacey
Feb 5, 2009·BMC Evolutionary Biology·Lukasz HuminieckiCarl-Henrik Heldin
May 15, 2009·BMC Evolutionary Biology·Nélida PohlAdriana D Briscoe
Jun 30, 2009·BMC Genomics·Andreas W SchreiberUte Baumann
Jul 18, 2009·BMC Genomics·Françoise Thibaud-NissenC Robin Buell
Apr 24, 2010·BMC Genomics·Ingrid Lafontaine, Bernard Dujon
Jan 23, 2010·BMC Genomics·Laurence DesponsJean-Luc Souciet
Oct 22, 2010·BMC Genomics·Marit S BratlieFinn Drabløs
Dec 22, 2010·BMC Genomics·Lev Y Yampolsky, Michael A Bouzinier
Jan 19, 2011·BMC Genomics·Douglas V CancheriniSandro J de Souza
Dec 14, 2011·BMC Genomics·Frédéric J J ChainBen J Evans
Aug 3, 2004·BMC Genomics·Alex N Zelensky, Jill E Gready
Mar 11, 2006·BMC Genomics·Andrew R CarsonStephen W Scherer
Feb 1, 2008·BMC Genomics·Magali LescotChristopher D Town
May 19, 2007·BMC Molecular Biology·Ernesto PavoniAndrea Brancaccio
Aug 7, 2010·BMC Plant Biology·Andrew J SeverinRandy C Shoemaker
Nov 11, 2010·BMC Plant Biology·Jia-Xing YueSihai Yang
Nov 23, 2010·BMC Plant Biology·Marcelo de F LimaPaulo Cg Ferreira
Apr 20, 2005·BMC Plant Biology·Tatsuya FukudaMasayuki Maki
Apr 18, 2008·BMC Plant Biology·Ramanjulu Sunkar, Guru Jagadeeswaran
Jun 30, 2009·BMC Plant Biology·Sergio JiménezDouglas G Bielenberg
Feb 8, 2011·Human Genomics·David N Cooper, Hildegard Kehrer-Sawatzki
Dec 17, 2009·BMC Biology·Deanna DryhurstJuan Ausió
Mar 16, 2007·Frontiers in Zoology·Evelyn E SchwagerWim G M Damen
Sep 10, 2010·Biology Direct·Alexander Y PanchinIrena I Artamonova
Apr 3, 2010·Cell Division·Stacey E Wirt, Julien Sage
Apr 3, 2004·Genome Biology·Ravindra PushkerFrancisco Rodríguez-Valera
May 7, 2004·Genome Biology·Ron J Okagaki, Ronald L Phillips
Jun 18, 2005·Genome Biology·Gavin C Conant, Andreas Wagner
Nov 14, 2006·Genome Biology·Dexter HadleyMaja Bućan